Halopseudomonas pelagia: EAO82_02375
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Entry
EAO82_02375 CDS
T07735
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpeg
Halopseudomonas pelagia
Pathway
hpeg03420
Nucleotide excision repair
hpeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAO82_02375
03430 Mismatch repair
EAO82_02375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpeg03400
]
EAO82_02375
Enzymes [BR:
hpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAO82_02375
DNA repair and recombination proteins [BR:
hpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAO82_02375
MMR (mismatch excision repair)
Other MMR factors
EAO82_02375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
FitA-like_RHH
Motif
Other DBs
NCBI-ProteinID:
QFY55323
LinkDB
All DBs
Position
514310..516493
Genome browser
AA seq
727 aa
AA seq
DB search
MDISHLLNSLNDAQRQAVTATPGQQLVLAGAGSGKTRVLVHRIAWLVEVENASPWSILSV
TFTNKAAHEMRHRIEQLLGISPQGMWVGTFHGLAHRLLRAHWKEAGLAEQFQILDSDDQL
RLVKRVIRELALDENQWAPRQAQWWINGQKDEGLRPQHIQAAGDLFLTTMLRIYQAYEQA
CARAGVVDFAELLLRSLELWRDNNALREQYQARFKHMLVDEFQDTNAVQYAWLRLIAGKT
PSLMVVGDDDQSIYGWRGAKIENIHQFQRDYPNSELIRLEQNYRSTACILNAANALITQN
AGRMGKELWTEGEEGEPIALYAGFNEQDEARFIVERIDQAVRDGMNRSEIAILYRSNAQS
RVLEEALLRAAVPYRIYGGQRFFERAEIKNAMAYMRLVANRGDDGALERIINLPTRGIGD
KTVEGLRQHARQQDVSMWQAACDLLDNKGLPGRAANAVQTFCQLIEDITVRVEGVPLYSM
AQQVIEHSGLLQFHENEKGEKGQARVENLEELVSAARAFENDQADEEAEGDTLLAFLAHA
SLEAGETQADRFEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVITWAETRRLYGSETFNKVSRFVREIPSELIREVRMGNQVSRPFGPGN
ASTSSLFQNDATESTGFALGQRVMHTLFGEGVVLNYEGQGAQARIQVNFDDEGSKWLMVS
YAKLQAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcgcatctgctcaactccctgaatgacgcccaacgccaggccgtaaccgcc
acccccggccagcagctggtgctggcgggtgccggctcgggcaaaacccgtgtgctggtg
caccggattgcctggttggtcgaggtcgagaacgcctcaccctggagcattctttcggtg
acctttaccaacaaggccgcccatgagatgcgtcaccgcatcgaacaactgctgggtatt
tccccccaaggcatgtgggtgggtactttccatggcttggcgcaccgcttgctgcgtgcg
cactggaaagaagccggtctggccgaacagttccagatcctcgatagcgatgaccaactg
cggctggtcaagcgggtcatccgcgagctggcgctggacgagaatcagtgggcaccgcgt
caggcccagtggtggatcaacgggcagaaggacgaaggtttgcgcccgcaacatatccag
gccgccggtgacctgtttctgactaccatgctgcgcatctatcaggcttacgagcaggcc
tgtgcgcgtgccggtgtggtcgattttgccgaattgctgctgcgttcgctggagctgtgg
cgtgataacaacgccttgcgagagcaatatcaggcgcgcttcaagcatatgctggtcgat
gagtttcaggacaccaacgcggtgcagtacgcctggctgcgtctgatcgccggcaagacg
ccgagtctgatggtggtcggcgatgacgaccagtcgatctacggctggcgcggggccaag
atcgagaacattcaccagttccagcgcgattacccgaactccgaactgatccgcctggag
cagaattaccgctccactgcgtgcattctgaatgccgccaacgcgctgatcacccagaat
gccgggcgcatgggcaaggagttgtggaccgagggcgaagagggcgagccgattgccctg
tatgctggcttcaatgagcaggacgaggcgcggtttattgtcgagcgtatcgatcaggcc
gtgcgcgacggcatgaaccgcagcgagatcgccattctgtaccgctccaacgcccagtcc
cgagtgctggaagaggcgctgctgcgtgcggccgtgccctatcgcatttatggcgggcag
cgctttttcgaacgcgcggaaatcaagaatgccatggcctatatgcgcctggtggccaat
cgcggcgacgatggtgcattggagcggatcatcaacctgccgacccgcggtatcggtgac
aagactgtcgaaggtctgcgccagcatgcgcgccaacaggacgtgtccatgtggcaggcg
gcctgtgatctgctcgacaacaagggcctgcccggtcgcgcagcgaatgcggtgcagacg
ttctgtcagttgattgaagatatcaccgtgcgcgtggaaggggtgccgctgtacagcatg
gcccagcaggtgattgaacacagcggcctgctgcagtttcacgaaaatgagaaaggtgag
aagggccaggcgcgggtggaaaacctggaagaactggtctctgctgcgcgggcgttcgag
aatgatcaggctgatgaagaggccgagggcgataccctgctggcgtttctcgcccatgcc
tcgctggaagccggagaaacccaggccgaccgctttgaagacagcgtgcaactgatgacc
ctgcacagcgccaagggtcttgagtttccactggtgttcctggccggggtggaagagggg
ctgttcccgcacaagatgagcctggaggagcccggccgtctggaagaggagcggcgcctg
gcgtatgtgggtattacccgggcgatgcagcaactggtgatcacctgggctgaaacccgg
cggctttacggtagcgaaaccttcaacaaggtctcccgctttgttcgcgagatcccctcc
gagctgatccgcgaagtgcgcatgggcaaccaggtcagccgtccctttggccccggcaac
gcgagcaccagcagtctgttccagaatgacgccaccgaaagcaccggtttcgcgctgggc
cagcgggtcatgcatacgctgtttggcgaaggcgtggtgctgaattacgaagggcagggt
gcacaggcacgcattcaggtcaatttcgacgacgaaggcagcaaatggctgatggtctcc
tatgcgaagcttcaagcgctttag
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