Halopseudomonas pelagia: EAO82_04130
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Entry
EAO82_04130 CDS
T07735
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hpeg
Halopseudomonas pelagia
Pathway
hpeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EAO82_04130 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpeg03400
]
EAO82_04130 (recC)
Enzymes [BR:
hpeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EAO82_04130 (recC)
DNA repair and recombination proteins [BR:
hpeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAO82_04130 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QFY55630
LinkDB
All DBs
Position
859146..862622
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AA seq
1158 aa
AA seq
DB search
MQDADDLNPGLMIIHGNRLESLRELVVDWMRAHPLAPLENEVILVQSNGIAQWLQMALAA
DAQHGGSGIAAALDVQLPARFLWDSYRGVLGREAVPETSPLDKQPLTWRLMRLLPMLLEQ
PAFAPLKRFLEDDVDCRKRYQLAERLADLFDQYQVYRADWLNDWAEGRDRIGLARQGHQP
LGVEELWQPALWRAVLQDVGAERLSDSRAGIHPRFVEHLLQVAERPLGLPRRVIVFGISS
LPAQTLEALAVIGRFSQVLLGVLNPCQYHWGDIVADQDLLRHQYKRQQRRPGMPATLDEQ
IVHQHAHPLLAAWGKQGRDYINLLDQHDERGAYEARFASINGGRVDLFEEPGGATLLEQL
QRDILELSPLAESRARWPALLGRGDESIRFHIAHSPQREVEILHDQLLAAFDADPNLKPR
DIIVMVPDVNTYAPHIQAVFGQHSTDAARYIPYTLADQGQRGQEPLLIALEHLLRLPDSR
LPVSEVLDLLDVPALRSRFGLSESDLPTLHRWIEGAGIRWGLDQRRRESLGMPAGLEANS
WRFGLRRMLLGYATGQGSAWADIEPYDEVGGLDAALIGPLSSLLQALDKYEQQLAQPASP
AVWGERLRGLLEAFFNAESDRDQLLLAQLQEGLANWLELCDSVSLDEPLPLNVVAEAWLE
GIGQTQLSQRFLAGAVNVCTLMPMRAIPFKRICLLGMNDGDYPRAQPPLDFDLMGRDYRP
GDRSRREDDRYLLLEALLSTRDSLYISWVGRSIRDNSERPPSVLIGQLRDHLTSGWRRED
GADLLASLTTEHPLQPFSRAYFTGDDPALFSYAGDWRALHDLPLQLQVDAPLPAMTLGNA
IELPALQRFLRNPVEHFFATRLKVWLHEQDTVTEDDEPFALNGLQRHQLSQWLLEQVQDL
DPDADWQAELTTQAARLMQRGSLPLAGFGGLTRDQLISPLENQLSRYREQLPVWPQVIEH
PLPLFASAPGIELRSWLAGVRQSAQDHGLLRLDLVTGSLLDKKGKAPRWRKLLNDLCLHV
LASASGHLLTSRLISADASVELLPLEQGQAQQIMHDWLLGWLEGLKRPLPVAAETAFALL
TEKKPEQQLFKAASCYDGSSFLTGEVSKSVALQRSYPDFASLLANEEFQGWAEALYLPLV
NGMDGGWITISAASEGEA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgctgacgacctcaatcccggcctgatgattattcacggtaatcgtctggaa
agtctgcgcgagctggtagtggactggatgcgcgcgcacccgctggcgccactggaaaat
gaagtcatcctggtgcagagcaatggcatcgcccaatggctgcagatggcgctggcggcc
gatgcgcaacacggcggcagcggtattgctgcagcgctggatgtgcaactgccggcacgt
tttctctgggatagttatcgcggcgtattgggccgagaagcagtgccggaaacttcgccg
ctggataaacagccactcacctggcggctgatgcgcctgttgccgatgctgttggaacaa
cccgcctttgccccgctcaagcgctttctggaagacgatgtcgattgccgcaaacgctat
caactggccgagcgcctggccgatctcttcgatcagtatcaggtttaccgcgcagactgg
ttgaatgattgggccgaaggccgtgatcgcatcggcctggcgcggcagggtcatcaaccg
ttgggagtggaggagctgtggcagccggcgctctggcgcgcggtattgcaagacgttggc
gcggagcgcctgagcgatagccgtgccggtatccatccgcgctttgtcgagcatctgttg
caggtggcggagcgcccgctagggttgccacgccgggtcatcgtcttcggcatttcctcg
ctgccggcccagacgctggaggcgctcgccgtgatcgggcgcttcagtcaggtgctgctt
ggtgtgctcaatccctgccagtaccactggggcgatatcgtcgccgaccaggatctgctg
cggcatcaatacaagcgtcagcagcgccgtcccgggatgcccgccaccctggatgagcag
attgttcatcaacacgcacatccgttgctggcggcctggggcaagcagggccgcgactat
atcaacctgctggatcagcacgacgagcgcggcgcttacgaagcacgctttgcttcgatc
aacggcggccgcgtcgatctgttcgaggagccgggcggcgcaaccttactggaacaattg
cagcgcgatattctggagctcagcccgctggcggaaagccgtgcgcgttggccggcgctg
ttgggtcgtggggatgagtcgatccgctttcatatcgcccacagcccgcagcgcgaagta
gagattctgcatgatcagctcctggcggccttcgacgctgatccgaacctgaaaccacgc
gacatcatcgttatggttccggacgtgaatacctatgcgccgcatatccaggcggtgttt
ggtcagcactcaactgacgcggcgcgctatatcccttataccctggcagatcaggggcag
cggggtcaggaacccttgctgattgcgctggagcacttgctgcgtctgccggacagccgt
ctgcccgtcagtgaggtactcgacctgctggatgtgccggccctgcgctcgcgcttcggg
ctgagcgagagcgatttaccaactttgcaccgctggatcgagggcgccggtatccgctgg
ggtctggatcagcggcggcgtgaaagtctcggcatgcccgccggccttgaagccaacagc
tggcgattcgggctgcgccgtatgctgctcggttatgccaccgggcagggcagcgcctgg
gccgatatcgagccctatgatgaagtcggcgggctggacgccgcgctgatcggcccgctg
agcagcttgctgcaggcactggacaaatacgaacagcaactcgcccagccggcaagcccg
gctgtgtggggcgaacgtttgcgtggcttgctggaagcctttttcaacgccgaaagcgat
cgtgaccagttgctgctggcgcaactgcaggaggggctcgccaactggctggagctttgt
gattcggtgtcgctggatgagccgctgccactgaacgtagtagccgaagcctggctggag
ggcatcggtcagacgcagttgagtcagcgctttctcgctggcgcggtgaatgtctgcaca
cttatgccgatgcgcgcgattccgttcaaacgcatctgtctgctgggcatgaatgatggc
gactaccctcgcgcccagccgccgctggatttcgatctgatgggccgggattatcggccc
ggcgaccgctcacggcgtgaggatgaccgttatctgctgctggaggcactgctctcgacc
cgcgacagtctttacatcagctgggtcggccgaagcattcgtgataacagcgagcgtccg
ccctctgtcttgatcggccagctacgcgatcatctgaccagcggttggcgccgcgaagat
ggggccgatctgctcgcgtcgctgaccaccgagcacccgctgcagcccttcagccgcgcc
tattttactggcgatgatccggcgctgttcagttatgccggggactggcgtgcactacac
gatctgccattacagctccaggtcgatgcgccgctgcccgcgatgaccctgggaaacgcg
attgagctacccgcgttacagcgctttctgcgcaatccggtcgagcatttctttgccacc
cggttgaaagtctggctgcacgagcaggacaccgtcaccgaggatgatgagccctttgcg
ctgaacggtctgcagcgccatcagcttagccagtggctgctcgagcaggtgcaggatctg
gaccccgatgccgactggcaggccgaactgaccacgcaggcggcgcgcctgatgcagcgc
ggtagtctgccgctggccgggtttggcgggctgacgcgggatcagttgatcagcccgctt
gagaatcaattaagtcgttaccgtgaacagttgccggtctggccgcaggtcatcgagcac
ccactgccgctgttcgccagtgcgccgggtatcgagctgcgcagttggctggctggcgta
cgtcagtcagcgcaggatcatggcctgctgcgcctggatctggtcaccggaagcctgctg
gataaaaaaggcaaggcgccgcgctggcgcaagctgctcaacgacctgtgcctgcatgtt
ctggcttctgccagcggtcacctgttgaccagcaggttgatcagtgcggacgccagcgtg
gagttattgccgctggagcaggggcaggcgcaacagatcatgcatgactggttgctcggc
tggctggaaggtttgaagcggccgctgccggttgcggcggaaacggcctttgccttgctg
acggagaaaaagcctgaacagcagttgtttaaggccgcgagctgttacgacggctccagc
tttttgaccggcgaggtgagtaaaagcgtggccttgcagcgcagctatccggattttgcc
agcctgctggccaacgaggagtttcagggctgggccgaagcgctctacctgccgttggtc
aatggcatggatggcggatggatcaccatcagcgcagccagtgagggcgaggcatga
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