Halopseudomonas pelagia: EAO82_06585
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Entry
EAO82_06585 CDS
T07735
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpeg
Halopseudomonas pelagia
Pathway
hpeg03030
DNA replication
hpeg03430
Mismatch repair
hpeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAO82_06585
03430 Mismatch repair
EAO82_06585
03440 Homologous recombination
EAO82_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpeg03032
]
EAO82_06585
03400 DNA repair and recombination proteins [BR:
hpeg03400
]
EAO82_06585
Enzymes [BR:
hpeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAO82_06585
DNA replication proteins [BR:
hpeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAO82_06585
DNA repair and recombination proteins [BR:
hpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAO82_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QFY56059
LinkDB
All DBs
Position
1384697..1388221
Genome browser
AA seq
1174 aa
AA seq
DB search
MTHSFVHLRVHSEFSLVDGIVKIKPLIKMVAEAGMPAVAVTDQNNMCSLVKFYKASMGGG
VKPISGVDVWLVGANDDNQLTRLSLLAMNRNGYRNLTELISRGYTEGQRNGVVTIRREWV
AESSEDVIALSGAKEGEIGQSLLSNNPQEADALLQYWMQVFPGRFYLELQRTSRPNDEEY
LHAAVDLAVKLDCPVVATNDVRFLKREDFEAHETRVCIGEGRALDDPRRVRQYSEEQYLK
TPAEMAELFSDIPEALANSMEIARRCNIDVQLGKNFLPAFPTPDGMSEADFFRKVSFEGL
EERLKVVLPPDSENYEARRQVYIDRLNFELDIIIQMEFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYSLLITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYVA
DTYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPFEVGMTLAKAFEQEE
ILRDFLANDEEAQEIWDMALKLEGVTRNVGKHAGGVVIAPTKLTDFAPLYCDEAGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIDWAMNTINRVRAKTGGAPLDINFIPLDDLPTYQM
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRE
ILSYPHPNYQLDSLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRAIFLEGCEGNNINADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHYP
APFMAAVLSADMHNTDKVVTLIEECRSMKLRLNPPDVNVSEYKFTVDDAGAVVYGLGAIK
GVGEGPVETIVEKRLQGGPFLDLFDFCARVDLKRINKRVMEALIRSGALDNLGPFFDTDQ
QAYLKNVDRNRASLMAAMEEAIAAAEQTAKSADSGHADLFGELLGPSTVRDVYEQYRKVR
EWTFKERLRGEKETLGLYLTGHPIDEYEKEIRRFARQRIIDLKPSRESQTIAGLVFDLRV
MKTKRGDKMGFVTLDDRSARIEVSLYAEAYQSSQALLQKDAMLVVEGEVSQDDFSGGLRM
RVKRVMSLEDARTTLLDSVRISLDTQRHGAQSLDQLAGLLRKFPGGCAVTVDLQRPDAAV
QLRLGEGWRVEPADDLVQGIRDHLGKDSVSLHYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattctttcgttcacttgcgtgtacacagcgagttctctctggttgacggtatc
gtcaagatcaagcccctgatcaagatggtagccgaggcagggatgccggcagtggcggtg
acggatcagaacaacatgtgcagcctggtgaagttctacaaggcgtccatgggcggtggg
gtcaagccgatttccggtgtcgatgtctggctggtgggcgccaatgatgacaaccagctt
acccgcctcagcctgctggccatgaaccgtaatggctaccgtaatctgaccgagttgatc
tcccgtggttataccgaaggccagcgtaacggcgtggtgaccattcgccgcgaatgggtg
gccgagtccagcgaagacgtgatcgcgctgtccggcgccaaggaaggtgagatcgggcag
tcactgctgtcgaacaacccgcaggaagccgacgctttgctgcagtactggatgcaggtc
tttcccggccgtttctacctggaactgcagcgcaccagccgcccgaacgacgaagagtat
ttgcacgctgccgttgatctggcggtcaagctggattgcccggtggtggcgaccaatgat
gtgcgcttcctcaagcgcgaggattttgaagcgcatgaaacgcgcgtgtgtattggtgaa
ggccgagcgctggatgatccgcgccgagtgcgccagtacagcgaagaacagtatctgaaa
acaccggccgagatggccgagctgttttccgacatcccggaagcattggccaatagcatg
gaaattgcccgccgctgcaatatcgacgtgcagttgggcaagaacttcctgccggccttt
cctacaccggacggcatgagtgaagcggacttcttccgcaaggtttcgtttgaagggctg
gaagaacgcctcaaagtcgtgctgccgcccgactctgagaattacgaagcacgccgtcag
gtgtatatcgaccggttgaatttcgagctggatatcatcatccagatggagtttcccggt
tacttcctgatcgtgatggacttcatcaagtgggccaagaacaacggcgtaccggttggc
ccaggccggggctccggggcagggtcgctggttgcctattcgctgctgattaccgatctt
gaccccctgcagtacgatctgctgttcgagcgctttctgaatccagagcgggtatccatg
cccgactttgacgtcgacttctgtatggaagggcgcgaccgggtcatcgagtatgtggcc
gacacctatggccgtaatgcggtatcgcaaatcatcaccttcggtaccatggcggccaag
gccgtggtacgtgacgtggcgcgggtgcagggcaagtcctacggcttggctgacaagctc
tcgaagatgattcccttcgaggtcggcatgaccctggccaaggccttcgagcaggaagag
atcctgcgcgactttctcgccaatgacgaagaagcccaggaaatctgggacatggcgctc
aagctggaaggggtcacgcgtaacgtcggcaagcacgccgggggcgtggtgatcgcgccg
accaaactgaccgactttgcgccgctgtattgcgacgaggctggcggcggtctggtaacc
cagttcgacaaggatgacgtggaagctgctggcctggtcaagttcgactttcttggtctg
cggaccctgaccattatcgactgggcgatgaacaccatcaaccgggtgcgggccaagacc
ggtggtgcgccgctggatatcaactttatcccgctggacgacctgcccacctaccagatg
ttgcagaaggccgagaccacggcggtgttccagctggaatcccgcggtatgaaagagctg
atcaagaagctcaagcctgactgcctggaagacctgatcgcccttgtggccctgttccgt
cccgggccactgcaatcaggcatggtcgacgactttatcaatcgcaagcacggccgtgag
atcctgtcctacccgcatccgaactatcagctcgacagcctgaagccggtattggcgccg
acctacggcattattctgtatcaggaacaggtgatgcagattgcccaggtcatggctggc
tatacgctcggcggcgccgacatgttgcgccgggccatgggtaagaaaaaacccgaagaa
atggccaagcagcgtgcgatcttccttgagggttgcgaaggtaacaatatcaatgctgat
ctggcaggcaacatatttgatctggtagaaaagttcgccggttacggtttcaacaagtcg
cactcggcagcctacggcctggtctcttatcagaccgcctggctcaaggcgcattatccc
gcgccctttatggcggcggtgttgtcggcggatatgcacaataccgacaaggtggtcacg
ctgatcgaagagtgccgcagcatgaagctgcgcctcaacccgccggatgtgaacgtctcg
gaatacaaattcacagtggatgacgccggtgccgtggtttatggcctgggcgcgatcaag
ggcgtgggtgaagggccggtggagaccatcgttgagaagcgtctgcagggcggtccgttt
ctcgatctgttcgacttctgtgcccgtgtcgatctcaaacgcatcaacaagcgagtaatg
gaagcgttgatccgttccggcgcgctggataacctcgggccgtttttcgacaccgatcag
caagcctatctgaaaaacgtcgaccgtaaccgggcgtcattgatggcggccatggaagaa
gcgattgcggcggccgagcagactgccaagagcgcggacagcggccatgccgatctattc
ggcgagctactgggcccttccaccgtgcgcgacgtgtacgagcaatatcgcaaggtacgt
gagtggaccttcaaggaacgtctgcgtggtgagaaagaaacgctcgggctgtatctgacc
ggccacccgattgacgagtatgaaaaagagattcgtcgttttgctcggcagcgcatcatt
gacctcaaaccctcgcgtgaaagccagacgattgccggtctggtgtttgacttgcgggtg
atgaaaaccaagcgtggcgacaagatgggctttgttaccctggacgatcgttcggcgcgg
atcgaagtgtcgctgtatgccgaggcgtatcagtcatcacaggcgttgttgcagaaagac
gctatgttggtggtggaaggggaggttagtcaggatgatttttctggtggcctgcgaatg
cgcgtcaagcgggtgatgagcctggaagacgcccgcacaaccttgctcgacagtgtgcgc
atcagcctggatacccagcgtcacggtgcgcagagcctcgaccagttggcgggcttgctg
cgcaaattccccggtggctgtgcggtaacggtggatctgcagcggccggacgccgcagtg
caattgcgcctgggtgaaggctggcgggttgagccggctgacgatctggtgcaggggata
cgtgaccacctgggtaaagacagcgtctctttgcactacagatga
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