Halopseudomonas pelagia: EAO82_07200
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Entry
EAO82_07200 CDS
T07735
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpeg
Halopseudomonas pelagia
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpeg03032
]
EAO82_07200
03400 DNA repair and recombination proteins [BR:
hpeg03400
]
EAO82_07200
Enzymes [BR:
hpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAO82_07200
DNA replication proteins [BR:
hpeg03032
]
Prokaryotic type
DNA Topoisomerases
EAO82_07200
DNA repair and recombination proteins [BR:
hpeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAO82_07200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
QFY56168
UniProt:
A0AA91TZX2
LinkDB
All DBs
Position
complement(1521770..1522819)
Genome browser
AA seq
349 aa
AA seq
DB search
MPDSALPADLPRDLHYVDDTQPGIRRKKSRGKFQYVDAKGERITDADEIKRLNSLAVPPA
YTDVWICADPSGHLQATGRDARGRKQYRYHPRWREVRDADKYSRLQEFGAALPKLRKQLE
AQIAEPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRDRHVDIKGSEIQFQ
FRGKSGVEHQVSVKDKRLAKVVKRCQDLPGQNLFQYLDEDGNRHTVSSADVNAYLHDLTG
ADFTAKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIH
PAVLDHFSLGELSKLPKPRVRKGLKAEEVALAMFLEQLAEELPEKAKAS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactccgcgttgcctgccgacctgcctcgcgacctgcattacgtggatgacacc
cagccgggcatccgccgtaaaaaatcgcggggcaagttccagtatgttgatgccaagggc
gagcgcattaccgatgccgatgaaatcaagcgactcaactcgttggcagtgccacccgcc
tataccgacgtgtggatttgcgccgacccgagcgggcatctgcaggccaccgggcgcgat
gcgcgtggacgcaagcagtaccgctatcacccgcgctggcgcgaagtgcgcgacgccgac
aaatactcgcgcctgcaagagttcggcgccgctctgcccaagctgcgcaagcagctggaa
gcgcagatcgccgaacccggctttacccgcgagaaggtgttggccacagtagtcatgttg
ctggatgccacgctgattcgggtcggcaacactcagtacgcgcgggacaacaagtcctac
gggctgaccaccctgcgcgaccgccatgtggatatcaagggcagcgagatccagtttcag
tttcgcggcaagagcggcgtagaacatcaggtcagcgtgaaggacaagcgcctggccaag
gtggtcaagcgctgccaggacctgcctgggcagaatctgtttcagtatctggatgaagac
ggtaaccgccatacggtcagctctgctgacgtcaacgcctacctgcacgatctgaccggg
gctgacttcaccgccaaggattaccgcacctgggccggtactgcgatggcactggcggta
ctgcgggagctggaatggcagccggaatcggacgccaaacgccacgtggtagcgatggtc
aaggacgttgccaagcaactgggcaacacccctgcggtgtgccgcaaatgctatatccac
cccgccgtgctcgatcacttcagcctgggggaattatccaagctacccaagccgcgggtg
cgcaagggcctgaaagccgaggaagtggcgttggcgatgtttcttgaacagttggcggag
gagctaccggagaaggccaaggcaagctag
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