Halopseudomonas pelagia: EAO82_12115
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Entry
EAO82_12115 CDS
T07735
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hpeg
Halopseudomonas pelagia
Pathway
hpeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EAO82_12115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpeg03021
]
EAO82_12115
Transcription machinery [BR:
hpeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EAO82_12115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_29
HTH_38
HEAT
GerE
HTH_24
HTH_17
HTH_Tnp_ISL3
HTH_11
Xre-like-HTH
HTH_40
DUF6362
MerR_1
HTH_28
DUF3080
TPR_28
HTH_10
MarR
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QFY57041
UniProt:
A0AA91Z7U6
LinkDB
All DBs
Position
2562373..2562891
Genome browser
AA seq
172 aa
AA seq
DB search
MSLPESDSFIPLEVLYGTHHGWLQNWLRRSVGCSHQAADLAQDTFMRLLVRDQPVNERAP
RALLARIARGLVIDYWRRDALERAYLEALAQQPELSHPSPEVRHEALQCLERIAQLLDGL
KPAVREAFLLYQLGGLNHAQVARKLGVSTRTVERHVARALLHCYRVCFEAPQ
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacctgaatcggattcgttcattccccttgaggtgttgtatggcacgcaccat
ggctggttacagaactggttgcggcggtcggtcggctgctcgcatcaagccgcggatcta
gcccaagacacctttatgcgtttgctggtacgcgatcagccagttaatgagcgggcgccg
cgtgccttgttggcacgcattgcccgtggcctggtgattgattactggcggcgtgatgca
ctggagcgtgcctatctcgaagccctggcacagcagcctgaactcagccatccctcaccc
gaggtccgccatgaggctctgcagtgcctggagcgcatcgcgcagttgctcgacggcctc
aaaccggccgtgcgagaagcctttctgttgtatcagcttggcggtttgaaccatgcccag
gtggcccggaaattgggcgtttccactcgtactgtcgagcggcatgtggcgcgcgcgctg
cttcattgctaccgcgtttgtttcgaggcgccacagtga
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