Halopseudomonas pelagia: EAO82_14170
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Entry
EAO82_14170 CDS
T07735
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpeg
Halopseudomonas pelagia
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpeg03032
]
EAO82_14170 (topA)
03400 DNA repair and recombination proteins [BR:
hpeg03400
]
EAO82_14170 (topA)
Enzymes [BR:
hpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAO82_14170 (topA)
DNA replication proteins [BR:
hpeg03032
]
Prokaryotic type
DNA Topoisomerases
EAO82_14170 (topA)
DNA repair and recombination proteins [BR:
hpeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAO82_14170 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QFY57411
LinkDB
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Position
complement(3016481..3019114)
Genome browser
AA seq
877 aa
AA seq
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MGKALVIVESPAKAKTINKYLGNDFIVKSSIGHIRDLPTSGSGKTESKPKGSRKAASAPE
VDKKTKARMQLVKRMGVDPDNGWKAHYEILPGKEKVIDELRRLAKDADTIYLATDLDREG
EAIAWHLRESIGGDEGRYKRVVFNEITKKAIQEAFAKPGELDLNRVNAQQARRFLDRVVG
YMVSSLLWQKIARGLSAGRVQSVAVKLIVDREREIRAFIPEEFWEVHALLNTPQSQSMRF
EVAKQNGETFRPVNKAQTDKALALLKGADYSVTKREDKPTSSKPNAPFITSTLQQAASTR
LGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAIGMARGYIEKNFGAKYLPEKPNVYS
SKDGAQEAHEAIRPSDVKLKTGDLKGMEKDAERLYELIWRQFLACQMTPAQYLSTLITVT
AGDFELRAKGRILKFDGYTKVMPQQGKGGEDEVLPDVKVKDVMALEKLDPKQHFTKPPAR
YSEASLVKELEKRGIGRPSTYASIISTIQDRGYVSQNNRRFYAEKMGDIVTERLAESFPN
LMDYSFTATMEESLDEVAQGGVIWKKVLDDFYKDFSLKLSVAETAEDGKGMRSNEPTLTD
IACKECGRPMMIRTASTGVFLGCSGYALPPKERCKSTVNLVPGNEVAADDDEGESRVLRN
KHRCPICSTAMDSYLVDEKRKLHVCGNNPDCNGFEVEEGQFKIKGYDGPIIECDKCGSEM
QLKTGRFGKYFGCTNSECKNTRKLLKSGEAAPPKMDPVKMPELKCEKVDDVYVLRDGASG
MFLAASQFPKNRETRAPLVKELLPHREEIDPKYHFLLDAPVKDPDGLPTVIRYSRKTKEQ
YVQSEVEGKPSGWRAFYDGKRWTADDGRPKAKAKAKG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagcactggtcattgttgagtctccagccaaggccaagacaatcaacaagtat
cttggtaacgatttcattgtgaagtcgagcatcggacatattcgcgatttgcccaccagc
ggcagtggcaagaccgagagcaagcccaagggtagccgtaaagctgcctccgctcctgaa
gtggacaagaagaccaaagcacgtatgcagctggtcaagcgcatgggcgtagacccggac
aatggctggaaagcgcattacgaaattctgccgggcaaggaaaaggtcatcgatgaattg
cgtcggctggccaaagacgctgacaccatctatctcgcgacggatttggaccgcgaaggg
gaggccattgcctggcacctgcgggaatccattggtggtgacgaaggccgctacaagcgt
gtggtcttcaacgaaattaccaagaaagccattcaggaagcattcgccaaacccggcgag
ttggatctgaatcgcgtcaacgcccagcaggcccgccgcttcctcgaccgggttgtgggt
tacatggtctcgtcactgctgtggcagaagatcgcccgtgggctctctgccggccgcgtg
caatcggttgcagtgaagctgattgttgatcgcgagcgtgagatccgcgcgtttatcccc
gaggaattctgggaagttcacgcgctgctgaacacgccgcaaagccagtccatgcgcttt
gaagtggccaagcagaacggtgaaaccttccgcccggtgaacaaggcgcagacggacaaa
gcgctggctttgctcaagggcgctgattacagcgttaccaagcgcgaagacaagccaacc
agctccaagcctaatgccccttttattacctccacgctgcagcaggccgccagtacgcgc
ctgggctttggcgtgaagaagaccatgatgatggcccagcgtttgtatgaggcgggttac
atcacctacatgcgtaccgactcgaccaatctgtctgctgatgcgattggcatggcgcgt
ggttatatcgaaaagaacttcggcgccaagtatttgcccgagaagcccaacgtctacagc
agcaaggatggcgcccaggaggcccacgaagcgatcaggccgtcggacgtcaagctgaag
accggtgatctcaaaggcatggagaaagacgctgagcggctctatgagctgatctggcgc
cagttccttgcctgccagatgacgcctgcccagtatttgtctaccttgatcacggttacg
gcgggcgacttcgagctgcgcgccaaaggccgcatcctcaagtttgatggttataccaag
gtcatgccgcagcagggcaagggcggcgaagatgaagtgctgcctgacgtgaaagtcaaa
gacgtcatggcgctggaaaagctggatcccaaacagcattttaccaagccgccggcgcgt
tattccgaagccagcctggtcaaggagctggagaagcgcggcatcggccggccctctacc
tacgcctcgatcatttccacgatccaggatcgcggttatgtctcccaaaataaccggcgc
ttctacgccgagaagatgggcgacatcgttaccgagcgtctggcggaaagctttccgaat
ctgatggactacagctttactgcgaccatggaagagtctctggacgaagtggcgcagggc
ggcgtgatctggaagaaggtactggatgatttctacaaggatttcagcctcaagctgagc
gtcgccgagacggctgaagacggcaagggcatgcgctccaacgagccgaccctgaccgat
atcgcctgcaaggaatgtggccggccgatgatgatccgcaccgcttccaccggcgtgttc
ctgggttgctccggctatgcattgccgccaaaagagcgctgcaagtcgaccgtgaatctg
gtgccgggcaacgaagtggcggccgatgatgatgaaggcgaatcacgcgttctgcgcaac
aagcatcgttgcccgatctgcagcaccgccatggacagttatctggtggatgagaagcgc
aagcttcacgtctgcggtaacaacccggactgcaacggcttcgaagtcgaggaagggcag
ttcaagatcaagggttacgacggcccgataattgagtgcgacaagtgcggcagcgagatg
cagctcaagactggccgcttcggcaagtattttgggtgcaccaacagcgaatgcaagaat
acccgcaagctgctcaagagcggtgaagcggcgccgccgaagatggacccggtgaagatg
ccggagctaaagtgcgaaaaggtcgatgacgtttacgtgctgcgcgatggcgcctcgggg
atgttcctggccgctagccagttcccgaagaaccgcgaaacacgcgcgcctctggtcaag
gaattgctgccgcaccgcgaggaaattgatcccaagtatcatttcctgctcgatgcaccg
gtcaaggatcctgatggcctgccaacggtaatacgttacagccgcaagactaaagagcaa
tatgtacagagtgaagtagagggcaagccgagcggatggcgcgccttttatgatggcaag
cgctggaccgcggatgatggtcggccaaaagccaaggctaaggccaaaggttga
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