Halopseudomonas pelagia: EAO82_16485
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Entry
EAO82_16485 CDS
T07735
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hpeg
Halopseudomonas pelagia
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpeg03021
]
EAO82_16485 (rpoS)
Transcription machinery [BR:
hpeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EAO82_16485 (rpoS)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QFY57822
LinkDB
All DBs
Position
complement(3561117..3562124)
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AA seq
335 aa
AA seq
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MGLNNNKEPDQYNEDIIVVNGREDRDEEIEMDAPRDDKPRSKVATPRNHKRENAFEFTKQ
LDATQLYLNEIGFSPLLTPEEEVHFARLAQKGDPAGRKRMIESNLRLVVKIARRYVNRGL
TLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNIYLRAARELTQKLDHEPSPEEISQLLDRPVEDVKRMLGLNERVASVDMAFGPDSDKTL
LDTLTDDHVTDPCELLQDDDLNASIDNWLSELTEKQREVVTRRFGLRGHESSTLEEVGRE
IGLTRERVRQIQVEALKRLREILEQHGLSGESIFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggattgaataataataaagagcccgaccagtacaacgaagacattatcgttgtaaat
ggacgtgaagacagggatgaggaaatcgaaatggatgcacctcgcgacgataagccccgg
agcaaggtagccaccccgcgcaaccacaagcgcgagaatgccttcgagtttaccaagcag
ctggatgcgactcagctgtacctgaatgaaatcggtttttcccccctgctcacgcccgaa
gaagaagtgcatttcgcgcgcctggcgcaaaagggtgatcccgccgggcgcaaacgcatg
attgaaagcaacctgcgcctggtagtgaaaatagcgcggcgttacgttaatcgtggtctg
acactgctcgatctgatcgaggaaggtaatctcggcctgattcgcgcggtagagaagttc
gaccccgagcggggattcagattctccacttacgccacctggtggattcggcagaccatc
gaacgcgcgatcatgaatcagacccgcaccattcgcctaccgattcatgtggtcaaagag
ctgaacatttatctgcgcgccgcgcgtgaattgacacaaaagcttgaccacgaaccctcc
ccggaagaaatctcgcaactcctcgatcgtccggtcgaggacgtcaagcgcatgctcggg
ctcaacgagcgggtcgcctctgtagacatggccttcggtcctgactcggacaagacgctc
ctcgataccttgacggacgaccatgtcaccgacccgtgtgagctgttacaggacgatgac
ctgaatgcgagcatcgataactggttgtccgagttgaccgaaaagcagcgcgaagtcgtt
acccgccgctttggcttgcgcgggcatgaaagcagtacgctggaagaagttgggcgggaa
atcggtctcacccgcgaacgggtaaggcagatccaggtcgaggcgttgaagcggctcagg
gagattctcgagcagcatggcctgtcaggtgaatcgatctttcaatag
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