Halopseudomonas pelagia: EAO82_16510
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Entry
EAO82_16510 CDS
T07735
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpeg
Halopseudomonas pelagia
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpeg03016
]
EAO82_16510 (truD)
Enzymes [BR:
hpeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EAO82_16510 (truD)
Transfer RNA biogenesis [BR:
hpeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EAO82_16510 (truD)
Prokaryotic type
EAO82_16510 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QFY57826
LinkDB
All DBs
Position
complement(3565557..3566621)
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AA seq
354 aa
AA seq
DB search
MTAAQLDCLGPTAWGSPCGSAVLKALPEHFCVTEVLDIAFSGQGEHLWLLIEKRNLNTEE
VAKRLARVAGLKIRDVSYAGLKDRKAVTRQWFSLQLPGRADPDFSALWSDDLQCIDSRRH
SRKLQRGAHSANHFVIHLTQLLADVGLLNARLQQIATRGVPNYFGPQRFGHAAGNVLDAR
GWAERGALPPARGTRSRLLSTARSLIFNRLLAQRVASGSWDQVLAGDCLAFTNSRSQFSA
ERLARDDPRLAALDVHPTGPLWGAGEPPVAADVAALERQAADTEPALVAWLLAAEVEQAR
RILRLPIAALTWHYPSPDSLVLEFTLPTGCFATAVLRELVTLTDEPGGGLESES
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgctcagcttgactgtctcggcccgactgcctggggttcaccctgcggcagt
gcggtactgaaagcgcttcccgagcatttttgcgtaaccgaagtattggacatcgcattc
agcgggcagggtgaacacctctggctgttgatcgaaaagcgcaatctgaataccgaagag
gtggccaagcgtttggccagggtggctgggctcaagatacgagatgtcagctatgccggt
ctcaaggaccgcaaggccgtcactcgtcagtggttcagtctgcagttgccgggccgagcc
gaccctgacttcagcgccctgtggagcgatgatctgcaatgtatcgacagccgtcgccat
agtcgcaagttgcagcgtggcgcgcacagcgccaatcattttgttattcacctgacccag
ctgctcgcggatgtcgggctgctaaacgcgcgtttgcaacagattgctactcgcggcgtg
ccgaattactttggcccgcagcggtttggtcatgctgcggggaatgtgctggatgcccgt
ggttgggcggagcgcggtgcattgccgccggcccggggtactcgctcgcgtctgctgtcc
acggcgcgcagcctgatattcaaccggctgcttgcccaacgggtggcatccggcagctgg
gaccaggtgctcgccggcgattgtctggccttcaccaacagccgcagccagttctctgcc
gagcgcctggccagggatgacccgcgtctggcggcgctggacgtgcatcccactggcccc
ctgtggggggcaggggagccacccgttgcagctgatgtagcggcgctcgagcgccaggcc
gctgatactgaaccagcgctggtcgcctggcttctggccgccgaagtagagcaggcacgg
cgcattttgcgcctccccattgctgcgctgacgtggcattatccctcaccggatagtctt
gtacttgaattcaccctgccgaccggctgttttgccacagcagtgctacgtgagcttgtt
acgctcacggacgagccgggcggtggactggaaagtgaaagctga
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