Halopseudomonas pelagia: EAO82_19050
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Entry
EAO82_19050 CDS
T07735
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hpeg
Halopseudomonas pelagia
Pathway
hpeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAO82_19050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpeg03019
]
EAO82_19050
Messenger RNA biogenesis [BR:
hpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EAO82_19050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Tautomerase_2
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QFY58273
UniProt:
A0AA92ETB5
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All DBs
Position
complement(4125987..4126508)
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AA seq
173 aa
AA seq
DB search
MIDPDGFRPNVGIILTNGSGQVLWARRIGQDAWQFPQGGIQRNETPEQALYRELHEEVGL
MPDDVEILACTRGWLRYRLPQRLIRSHSQPVCVGQKQKWFLLRLTADEQQVCMTKTPKPE
FDGWRWVSYWYPLGQVVAFKRDVYRRAMKELAPRLPLGLDASDWMETTGWKRE
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccctgatggcttccgtcccaatgtaggcatcatcctgaccaatgggtccggg
caggtgctgtgggcgcggcgtatcggccaggatgcatggcagtttccgcagggcggtatt
caacgcaatgaaacgcctgaacaggcgttgtaccgcgaattgcatgaagaagtcggcttg
atgcccgacgatgttgaaattcttgcctgcacccgtggctggctgcgctaccgtttaccc
cagcgcttgattcgtagccactctcaacctgtatgtgtgggtcagaagcagaaatggttt
ttgctgcggctgaccgccgatgagcaacaagtctgtatgaccaagacccctaagcccgaa
tttgacggttggcgttgggtcagttactggtatccgctgggccaggtggtggctttcaaa
cgcgacgtttatcgtcgtgcaatgaaggaattggcgccgagactgccgctgggtttggac
gcgagcgattggatggaaacgactggatggaaacgtgagtaa
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