KEGG   Halosimplex pelagicum: HZS54_00115
Entry
HZS54_00115       CDS       T06697                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
hpel  Halosimplex pelagicum
Pathway
hpel03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hpel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HZS54_00115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpel03032]
    HZS54_00115
DNA replication proteins [BR:hpel03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     HZS54_00115
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N AAA_14 AAA_assoc_2 RCF1-5-like_lid AAA_16 Rad17 AAA_22 DNAX_ATPase_lid ResIII nSTAND3 AAA_2 AAA_24 AAA_5 AAA_25 Gp44_lid NB-ARC AAA_18 AAA_7 RBD-FIP IstB_IS21 RNA_helicase TsaE NACHT NPHP3_N
Other DBs
NCBI-ProteinID: QLH80124
UniProt: A0A7D5P735
LinkDB
Position
complement(17972..18955)
AA seq 327 aa
MSEADTDSGSRAGREEVWIEKYRPQTLDEIVGQEDIVERLQSYVDRNDLSHFMFSGPAGI
GKTTSATAIARELYGDDWGENFLELNASDERGIDVVRDRIKNFARTSFGGYEYRIIFLDE
ADALTADAQGALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLSDEAVAEEM
RHIAGEEGIEVTDDGLDALVYAADGDMRKAINALQAASVTGEVVDEEAVYALTSTARPEE
IKEMVDQALDGDFTAARSTLDRLLTEEGIAGGDVIDQLHRSVWEFDLEDEAAVRLLDRIG
ETEYRITTGANERIQLEALLASVALDD
NT seq 984 nt   +upstreamnt  +downstreamnt
atgagcgaggccgacacggactcggggtcacgggcgggacgggaggaggtctggatcgag
aagtaccgcccccagaccctcgacgagatcgtcggacaggaggacatcgtcgagcgcctc
cagagctacgtcgaccgcaacgatctcagccacttcatgttctcggggccggccggtatc
gggaagacgaccagcgcgacggccatcgcccgcgaactctacggcgacgactggggggag
aacttcctcgaactcaacgcctccgacgagcgcggcatcgacgtggttcgcgaccgcatc
aagaacttcgcgcgcacgtccttcggcggctacgagtaccgaatcatatttctcgacgag
gccgacgcccttaccgccgacgcacaaggagcgctccgccggacgatggagcagttctcg
aacaacgtccgcttcatcctctcgtgtaactactccagccagatcatcgacccgatccag
tcccggtgtgcggtctttcgcttctcgccgctgtcggacgaggcggtcgccgaggagatg
cgccacatcgccggcgaggagggcatcgaggtcaccgacgacggcctcgacgcgctggtc
tacgccgccgacggcgacatgcgcaaggcgatcaacgccctgcaggccgcctccgtcacc
ggcgaggttgtcgacgaggaggccgtctacgcgctcacctcgacggcccgcccggaggag
atcaaggagatggtcgaccaggcgctcgacggcgacttcaccgccgcgcggtcgacgctc
gaccggctgctcaccgaggagggcatcgccggcggcgacgtgatcgaccagctccaccgc
tcggtgtgggagttcgacctggaggacgaggcggccgtccggctgctcgaccgcatcggc
gagaccgagtaccggatcacgaccggcgccaacgagcgcatccagctcgaagcgctgctc
gcgtcggtcgcgctcgacgactga

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