Halosimplex pelagicum: HZS54_00235
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Entry
HZS54_00235 CDS
T06697
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS54_00235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpel03021
]
HZS54_00235
Transcription machinery [BR:
hpel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS54_00235
Prokaryotic type
Archaeal type
TFB
HZS54_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
ORC6_2nd
DZR
DUF7129
DUF5795
Cas12f1-like_TNB
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
QLH84866
UniProt:
A0A7D5PAL6
LinkDB
All DBs
Position
36640..37524
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AA seq
294 aa
AA seq
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MDARADADADSVCPECGGRVRESETETVCEDCGLVAAEDAVERGPEWRSLEGDTDRRRTG
APLTESRHDRGLSTEIGYGTGSEVSGTRQRQLVRMRRQHNRARVDSKAERNKLYAYTEIR
RLVSVMSLPTSVRDQSCSLFSSAQSEELLCGRSLEGFAAAVVYATCRTQSIARTMDEVVD
VARAERSELKAAYDALNRELGLPVGPVSPTEYLPRYASDLDVDTDVERQAREYAVVLVES
GRMGGKNPSGVAAACLYKAATEAGVDVKQTEAAELADVSRMTIGSTVGDLDDLA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atcgacgcccgagcggacgcggacgccgactcggtgtgtccggagtgcggtggacgagtc
cgggagagcgagacggagacggtctgcgaggactgcgggctggtcgcggcggaggacgcc
gtcgagcgggggccggagtggcggtcgctcgagggggacaccgaccgtcgccggaccggc
gcgccgctgacggagtcccggcacgaccgcgggctctcgacggagatcggctacgggacc
ggctccgaggtctccggcacgcgccagcgacagctggtgcggatgcgccgccagcacaac
cgcgctcgggtcgactcgaaggccgagcgcaacaagctctacgcctacacggagatcagg
cggctggtctcggtcatgtcgcttcccacgtcggtgcgcgaccagtcgtgttcgctgttc
tcctcggcccagtccgaggagttgctctgcgggcggtcgctggaggggttcgccgccgcg
gtcgtctacgccacctgtcggacccagtccatcgcgcggacgatggacgaggtcgtcgac
gtggcccgcgccgagcggagcgaactcaaggcggcctacgacgcgctcaaccgcgaactc
ggcctcccggtcggaccggtcagtccgacggagtacctgccgcggtacgcctccgatctc
gacgtggacaccgacgtcgagcggcaggctcgcgagtacgccgtcgtgctcgtcgaatcg
ggccggatgggcgggaaaaatcccagcggcgtcgccgcggcctgtctctacaaggccgcc
accgaggccggcgtcgacgtcaaacagaccgaggccgccgagctggccgacgtgtcgcgg
atgaccatcggctcgaccgtcggcgacctcgacgacctggcgtag
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