Halosimplex pelagicum: HZS54_02160
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Entry
HZS54_02160 CDS
T06697
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HZS54_02160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpel03019
]
HZS54_02160
03012 Translation factors [BR:
hpel03012
]
HZS54_02160
Messenger RNA biogenesis [BR:
hpel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HZS54_02160
Translation factors [BR:
hpel03012
]
Eukaryotic type
Release factors
HZS54_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
QLH80506
UniProt:
A0A7D5P485
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Position
420089..421333
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AA seq
414 aa
AA seq
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MSEHAEQSDKQKYEFRKVIEELKGYSGSGTQLVSIYIPEDRQVSSVVAHVTQEHSEAANI
KSKDTRTAVQDALTSIKDRLRYYDTYPPENGMVVFSGSIDTGGGRSEMITRTLESPPQPI
ESFRYHCDSDFLTEPLEEMLADKGLFGLVVLDRREANVGWLRGKRVEPVKSASSLVPGKQ
RKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVDDRHEMDGILVGGPSPTKDEFLDGDY
LHHELGDMVLGKFDVAYTDESGLHDLVDAAQDVLDEHEMLQDKKYMEQFFDELHDGDLAT
YGFGPTRENLNMGAVETLLLSEDLRQDVAVYDCPEGHTERELLGQSESLDDERACDRCGE
TMDGEREDAIDHLMELADQRGTETYFVSTDFEKGEQLLSAFGGIAGILRYSTGV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcacgccgaacagtcggacaaacagaaatacgagttccgcaaggtcatcgag
gagctcaagggctacagcgggtcggggacgcagctggtctcgatctacatcccggaggac
cgccaggtcagcagcgtcgtcgcccacgtcacccaggagcacagcgaggcggccaacatc
aagtccaaggacacccgcacggccgtccaagacgccctgacctccatcaaggaccgcctg
cggtactacgacacctacccgccggagaacgggatggtcgtcttctcggggtcgatcgac
accggcggcggccgctcggagatgatcacccgcacgctggagagcccgccccagcccatc
gagtcgttccgctaccattgcgactccgatttcctcaccgagccgctggaggagatgctc
gccgacaagggcctgttcggcctggtcgtcctcgaccgacgcgaggccaacgtcggctgg
ctgcgcggcaagcgcgtcgaacccgtcaagtccgcctcctcgctggtaccgggcaagcag
cggaaagggggtcagtccgcacagcggttcgcccgcctgcgcctcgaagccatcgacaac
ttctaccaggaggtcgcggggatggccaacgacctgttcgtcgacgaccgccacgagatg
gacggtatcctcgtgggcggcccctcgccgacgaaagacgagttcctcgacggcgactac
ctccaccacgaactcggcgacatggtgctcgggaagttcgacgtggcctacaccgacgag
tccgggctccacgacctggtcgacgccgcccaggacgtgctcgacgagcacgagatgctc
caggacaagaagtacatggagcagttcttcgacgaactccacgacggcgacctcgcgacc
tacgggttcggccccacccgcgagaacctcaacatgggcgccgtcgagacgctcctcctg
agcgaggacctccggcaggacgtggccgtctacgactgccccgagggccacaccgagcgc
gagctactcggccagagcgagagcctcgacgacgagcgggcctgcgaccgctgcggcgag
acgatggacggcgaacgcgaggacgccatcgaccacctcatggaactcgccgaccagcgc
ggcacggagacctatttcgtctcgacggacttcgagaagggcgaacagctcctctcggcc
tttggcggcatcgccggcatcctgcggtactcgaccggcgtctag
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