Halosimplex pelagicum: HZS54_03800
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Entry
HZS54_03800 CDS
T06697
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03022
Basal transcription factors
hpel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS54_03800
09124 Replication and repair
03420 Nucleotide excision repair
HZS54_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpel03021
]
HZS54_03800
03036 Chromosome and associated proteins [BR:
hpel03036
]
HZS54_03800
03400 DNA repair and recombination proteins [BR:
hpel03400
]
HZS54_03800
Enzymes [BR:
hpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HZS54_03800
Transcription machinery [BR:
hpel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HZS54_03800
Chromosome and associated proteins [BR:
hpel03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HZS54_03800
DNA repair and recombination proteins [BR:
hpel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HZS54_03800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
ATPase
AAA_22
AAA_34
Zot
nSTAND3
PhoH
IstB_IS21
AAA_7
SecA_DEAD
TrwB_AAD_bind
AAA_25
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QLH84896
UniProt:
A0A7D5TJF8
LinkDB
All DBs
Position
complement(755766..757934)
Genome browser
AA seq
722 aa
AA seq
DB search
MGTIYDALDEKRNVLFEGATGTGKTLSALAPALEYARETNKTVVITTNVHQQMRQFVREA
AAITDQEPIRAVVFQGKASMCHIDVGYEECQALRDTTRELVDAEENREELEDQQRALLEE
SQDGSAEAADARGAVMDELESVEEEIEQLREERNVCDHYYRNLTADTDAFYGWLYDDVRT
PEDVYGYAEREGMCGYELLKEGMEGVDLVVCNYHHLLDSMIREQFFRWLGRDPEDVIAVF
DEAHNVEDAARDHARRTLTETTLDQAVDELETAEDARAEGALNVLDTFRRALVDAYDEAL
GFGEREGVEEDWYDLSIDNEDARDELTLAFLQNYSGPGFREELDRTLDLARELDQSYEEA
YKNGETTTRQECQTLQAATFVEAWLDESAAEGQYPVVSVRRAEDGGPREAGDIYGRAELY
TCIPSQVTADLFGDLHAGVLMSATLRPFDVTEDVLGLDDPETLAYGPQFPEERRRTYAVD
GPALFASKRDDMQVQSTVAGALEDAARFTPGNTLAFFPSYAEAERYHQRVDTGGATYLDR
PGTSARELRERFTDDDDAVLFTSLWGTLAEGVSFDGDDARTVVVVGVPYPHLDDRMDAVQ
EAYDAEFGEDEGAGRGGSGSSGGRDDDEGAGWRYAVEIPTVRKTRQALGRVVRSPEDFGA
RILLDGRYTERSEVEMSDYSVRGTFPPEERREMVDIDPGKLKFALLNFYQDVDGYDGEPP
RP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggggaccatctacgacgcgctcgacgagaagcgaaacgtcctcttcgagggggcgacg
gggacgggcaagaccctctcggcgctcgcgcccgcgctggagtacgcccgggagacgaac
aagacggtcgtcatcacgacgaacgtccaccagcagatgcgccagttcgtccgcgaggcc
gcggcgatcaccgaccaggagccgatccgcgccgtggtcttccaggggaaggcgtcgatg
tgtcacatcgacgttggctacgaggagtgccaggcgcttcgggatacgacccgcgaactc
gtcgacgccgaggagaacagggaagaactcgaagaccagcagcgcgccctcctcgaagag
agccaggacggcagcgccgaggcggccgacgcacgcggcgcggtgatggacgaactggag
tcggtcgaggaggagatcgagcaactgcgcgaggagcgcaacgtctgcgaccactactac
cggaacctgaccgccgacaccgacgccttctacggctggctctacgacgacgtgcgcacg
cccgaggacgtgtacggctacgccgaacgggagggcatgtgcggctacgaactgctcaag
gagggcatggagggcgtggacctggtggtctgcaactaccaccacctgctcgactcgatg
atccgcgagcagttcttccggtggctcggccgtgaccccgaagacgtgatcgccgtcttc
gacgaggcccacaacgtcgaggacgccgcccgcgaccacgcccgccgcacgctcaccgag
acgacgctcgaccaggcggtcgacgagctggagaccgccgaggacgcccgcgccgagggc
gcgctgaacgtcctcgacacgttccggcgggcgctggtcgacgcctacgacgaggccctc
ggcttcggcgagcgcgagggcgtcgaggaggactggtacgacctgtcgatcgacaacgag
gacgcccgcgacgagctgacgctcgcctttttacagaactactccgggccggggttccgc
gaggagctcgaccggacgctggacctggcgcgggagctcgaccagtcctacgaggaggcc
tacaagaacggggagacgaccacgcgccaggagtgccagacgctgcaggccgccaccttc
gtcgaggcctggctcgacgagtccgccgccgaggggcagtacccggtcgtgagcgtccgt
cgcgccgaggatggcgggccgcgggaggccggcgatatctacggccgcgcggagctgtac
acctgcatcccgagtcaggtgaccgccgatctgttcggcgacctgcacgcgggcgtgctg
atgagcgcgacgctgcgccccttcgacgtgaccgaggacgtgctcgggctcgacgacccg
gagacgctggcctacggcccgcagttccccgaggagcgccggcggacctacgcggtcgac
ggccccgccctgttcgccagcaagcgcgacgacatgcaggtccagtcgacggtcgcgggc
gcgctggaggacgccgcgcggttcacgcccggcaacaccctggccttcttcccgagctac
gccgaggccgaacggtaccaccagcgggtcgacaccggcggggcgacctacctcgaccgc
ccgggcacctcggccagggagctgcgcgagcggttcaccgacgacgacgacgccgtcctg
ttcacttcgctgtggggcaccctcgccgagggggtgagcttcgacggcgacgacgcccgg
acggtcgtcgtcgtcggggtcccctacccccacctcgacgaccgcatggacgccgtccag
gaggcctacgacgccgagttcggcgaggacgagggcgcgggtcgcggcggctcggggtcg
agcggcgggcgggacgacgacgagggcgcgggctggcgctacgccgtcgagatccctact
gtcaggaagacccgtcaggcgctgggtcgggtcgtccgctcgcccgaggacttcggcgcc
cggatcttgctcgacgggcgctacaccgagcgctcggaggtcgagatgtccgactactcc
gtccgcgggaccttcccccccgaggagcgccgcgagatggtcgacatcgaccccgggaag
ttgaagttcgcgctgctgaacttctaccaggacgtggacggctacgacggcgaaccgcct
cggccctga
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