Halosimplex pelagicum: HZS54_07525
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Entry
HZS54_07525 CDS
T06697
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hpel
Halosimplex pelagicum
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpel03016
]
HZS54_07525 (thpR)
Enzymes [BR:
hpel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HZS54_07525 (thpR)
Transfer RNA biogenesis [BR:
hpel03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HZS54_07525 (thpR)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QLH81486
UniProt:
A0A7D5P5T6
LinkDB
All DBs
Position
complement(1518953..1519510)
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AA seq
185 aa
AA seq
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MGKRLFVGVDLDGLADEVVAVQERFAGASGLNFTDPEGAHVTLKFLGDTDPDRLDELTDE
LAAAVDDAGVDPFECEFDGLGVFPALDYISVVWVGTRSGGEELTRLHEAVEERTTAMGFD
AEDHEFTPHVTIARMDHAGGKELVQETVRESDPDAGRLAVEEIRLKESVLGPDGPTYDTV
ERFPL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgactgttcgtcggcgtcgacctcgacgggctcgccgacgaggtggtggcc
gtccaggagcggttcgcgggggcgtcgggcctgaacttcaccgaccccgagggggcccac
gtcacactcaaattcctcggcgacaccgaccccgaccggctcgacgaactcacggacgaa
ctcgcggcggcggtcgacgacgccggcgtcgatcccttcgagtgcgagttcgacggcctg
ggcgtcttcccggctctcgactacatcagcgtggtctgggtcgggacgcgctcggggggc
gaggagctgacgcgcctgcacgaagccgtcgaggagcggacgacggcgatggggttcgac
gccgaggaccacgagttcacgccccacgtcacgatagcccggatggaccacgccggcggg
aaggaactggtccaggagacggtccgcgagagcgaccccgacgcggggcggctcgcggtc
gaggagatccggctgaaagagagcgtgctggggcccgacgggccgacgtacgacaccgtc
gagcggttcccgctgtag
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