Halosimplex pelagicum: HZS54_10055
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Entry
HZS54_10055 CDS
T06697
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpel
Halosimplex pelagicum
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpel03016
]
HZS54_10055 (truD)
Enzymes [BR:
hpel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HZS54_10055 (truD)
Transfer RNA biogenesis [BR:
hpel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HZS54_10055 (truD)
Prokaryotic type
HZS54_10055 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QLH81950
UniProt:
A0A7D5T9J4
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All DBs
Position
2047027..2048508
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AA seq
493 aa
AA seq
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MREAHPVERAVGMAYYVSDAPGVGGHLRESPEDFRVTEVEAFEPDPLDADAGAYPNVLAR
VTLRGWDTNDFASELSDRLGISRERVSWAGTKDKHAVTTQLFSVAKADPDEVRAVEIRDA
EVELLGRTGRPVLFGDLAGNAFEITVRGVDEPEHADATTSDLRAFASGDDAAESGDPDAA
ADEPATVGVPNYFGQQRFGSKRPVTHEVGLEILRGDWKGAVLAYVGSPAEREPESTREAR
AYVDETEDWAGALDRLPKRLGFERSMCHRLVERQEERGGEGEGDGECERGDDGLTDEDYR
AALEAVPSNLQRLFVNAAQSYAFNRMLSERLERGLPFHEPVAGDVVCFADSEAPEGVALP
DTDRTQRVTEDRLRTVRRHCERGRAFVTAPLVGTETDLADGEMGEIERAVLDDLDLDPAD
FDLPGEFESTGTRRAVLLRTELSVDRAAPDRDGDDADDADDTDGALAFEFTLPKGSYATV
VLREYLKRDPDDL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcacaccccgtcgagcgggcggtcgggatggcatactacgtcagcgacgcg
cccggggtgggcggccacctccgcgagtcgcccgaggacttccgcgtcaccgaggtcgag
gcgttcgagcccgacccgctcgacgccgacgccggcgcctaccccaacgtgctcgcacgg
gtcacgctgcgagggtgggacaccaacgacttcgcgtcggaactgtcggatcgcctgggt
atctcccgcgaacgcgtctcctgggcggggacgaaggacaaacacgccgtcacgacgcag
ctgttctcggtcgccaaggccgaccccgacgaggtgcgagcggtcgagatccgcgacgcc
gaggtcgaactcctcggccgaactggccggcccgttctcttcggcgatctggcgggcaac
gccttcgaaatcaccgtccgcggcgtcgacgaacccgaacacgccgacgcgacgacctcg
gacctgcgggcgttcgcgagcggggacgacgccgcggagtcaggggacccggacgccgcg
gccgacgaacccgcgaccgtcggagtcccgaactacttcgggcagcagcggttcggcagc
aagcggccggtcacccacgaggtcggcctggagatcctccgcggcgactggaagggcgcg
gtgctggcctacgtcggcagtccggccgagcgcgaaccggagtcgacgcgggaggcccgc
gcgtacgtcgacgagaccgaagactgggcgggcgcgctcgataggctgccgaagcgactc
ggcttcgagcggtcgatgtgtcaccggctggtcgagcgacaggaggagcgagggggcgag
ggagagggagacggcgagtgcgagcgcggcgacgacggcctcaccgacgaggactaccgc
gccgcactggaagcggtcccctccaatctccagcggctgttcgtcaacgccgcccagtcc
tacgcgttcaaccggatgctctccgagcgactggagcggggcctcccgttccacgagccc
gtggcgggcgacgtggtctgtttcgccgattcggaggcgcccgagggtgtcgcgctgccg
gacaccgaccgcacccagcgcgtgaccgaggaccggctgcggacggtccgccgccactgc
gagcgcgggcgggcgttcgtcaccgcaccgctggtcggcaccgagaccgacctcgccgac
ggcgagatgggcgagatcgaacgcgcggtgctggacgacctggacctcgaccccgcggac
ttcgacctgccgggcgagttcgagtcgacggggactcggcgggcggtcctgttgcggacg
gagctgtccgtcgaccgcgccgcccccgaccgggacggcgacgacgccgacgacgccgac
gacaccgacggcgcgctcgccttcgagttcacgctgccgaaggggagttacgcgacggtc
gtcctgcgcgagtacctcaagcgcgaccccgacgacctctga
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