Halosimplex pelagicum: HZS54_10140
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Entry
HZS54_10140 CDS
T06697
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS54_10140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpel03021
]
HZS54_10140
Transcription machinery [BR:
hpel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS54_10140
Prokaryotic type
Archaeal type
TFB
HZS54_10140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_ribbon_PaaD
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QLH81965
UniProt:
A0A7D5PAR3
LinkDB
All DBs
Position
complement(2064277..2065038)
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AA seq
253 aa
AA seq
DB search
MTVSSATCPLCGSSETEPINETELLCSECSFIVTGPDKVANEYKQENARSRTSSNSESTT
GEWEDKVAVRDSSDGTLVEMIAIAEEFVRALRGDSDNCIKTAEMLAEAWQDQYFQGRSVS
VGIAAVIYASFRQQKSPRPLRVVAQTCEISDQQLRTGYRALRTEYDVHSEITPPAMYLPF
LRCQLSLDQAVERRAREILSSEIESTGSPTSLASACIYLAAKEQGRSVTLAKVGAACGVS
KETVWKKTQEISN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacagtctcatcagcaacatgccccctttgcggatcctcagaaaccgaaccaatcaat
gaaactgaattactctgttcggagtgtagcttcatcgttactggtccagataaggtagca
aacgaatataaacaagagaatgcccggtctcggacatcttccaactctgagagcaccact
ggagaatgggaggacaaagtagccgtccgtgattcctcagatggcaccctagttgagatg
atagcaatcgcagaagagttcgttcgggctctcagaggtgacagcgacaactgtatcaaa
acggccgagatgctcgctgaagcatggcaagaccagtactttcagggtcgcagtgtctct
gtgggaatagcagcagtaatctatgcgagctttcgacaacaaaagtcaccgcgacctctg
agagtcgtcgctcaaacgtgtgaaatatcagatcagcagcttcgaacaggatatcgtgca
cttagaacagaatacgatgttcacagtgaaatcactccccctgcaatgtatctcccattt
ctaagatgccagctcagcttggaccaagctgttgaacgacgggcccgggagatactctcg
tccgaaattgaatctactgggagtccgacaagcctcgcctctgcctgtatctatctcgca
gccaaagagcagggcagatcagttacgttagctaaggtgggtgctgcgtgtggagtgtca
aaggagactgtctggaagaagacccaagagatctcgaactaa
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