Halosimplex pelagicum: HZS54_14995
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Entry
HZS54_14995 CDS
T06697
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HZS54_14995 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpel03021
]
HZS54_14995 (rpoB)
Enzymes [BR:
hpel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HZS54_14995 (rpoB)
Transcription machinery [BR:
hpel03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HZS54_14995 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-ProteinID:
QLH82850
UniProt:
A0A7D5TAL7
LinkDB
All DBs
Position
complement(3001685..3003511)
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AA seq
608 aa
AA seq
DB search
MSQQREAKVYVNGSLVGTHPDPHQLADQIRQARRRGDVSEMVNVSVKNRTREVIVNADAG
RARRPLLVIEDGEPIISDEEVEAVKDGDMEFEELVERGYIEFIDAEEEEDIYVAVNEEEL
NEDHTHLEVDPQLMFGIGAGMIPYPEHNASPRITMGSGMIKQSLGLPSANYRIRPDTRQH
LLHYPQLSLVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVMNKGSVDRGLSRSH
FFRTYEGEERRYPGGQEDHFEIPDDEVRGARGEEAYTHLDEDGLVNPETHVGENDVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDERI
PELGDKFASRHGQKGVVGHIAPQEDMPFTEQGVVPDLIINPHALPSRMTVGHILEMIGGK
VGSLEGRRVDGTAFTGEDEDELRGSLEEHGFMSSGKEIMYSGITGEQIEAEIFLGTIFYQ
KLYHMVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLD
ESDREFINVCGECGMTAVENVEQRRVYCPNCDEETEIHEVEMSYAFKLLLDEMKALGIAP
RIELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaacgagaagccaaagtctacgtcaacgggagcctggtcgggacacacccc
gacccgcatcagctcgcagaccagatccgacaggcccgccgccgcggcgacgtgagcgag
atggtcaacgtctcggtcaagaaccgcacgcgcgaggtcatcgtcaacgccgacgccggc
cgcgctcgccgccccctgctcgtcatcgaggacggcgagccgatcatctccgacgaggag
gtcgaggccgtcaaggacggcgacatggagtttgaggagctcgtcgaacgcggctacatc
gagttcatcgacgccgaggaggaggaggacatctacgtcgcggtgaacgaggaggaactg
aacgaggaccacacccacctcgaagtcgacccgcagctgatgttcggtatcggcgcgggg
atgatcccgtaccccgagcacaacgcctcgccccggattacgatggggtcggggatgatc
aagcagtcgctcggcctgccgagcgccaactaccggatccggccggacacgcgccagcac
ctgctgcactacccgcagctctcgctcgtgaaaacgcagacgaccgagcagatcggctac
gacgaccgaccggccgcgcagaacttcgtggtcgcggtcatgtcctacgaggggttcaac
atcgaggacgccctcgtcatgaacaaggggtcggtcgaccggggcctctcccggtcgcac
ttcttccgcacctacgagggcgaggaacggcgctaccccggcggccaggaggaccacttc
gagatccccgacgacgaggtccgcggtgcgcgcggcgaggaggcgtacacccacctcgac
gaggacggcctcgtcaaccccgagacccacgtcggcgagaacgacgtgctgctcgggaag
acctccccgccccggttcctcgaagagccggacgacatgggcgggctctccccgcagaag
cggcgagagacctccgtgacgatgcgctccggtgaatcgggcgtcgtcgacacggtgacc
ctgatggagggcgaggacggttcgaagctctcgaaggtctcggtgcgcgacgagcgcatc
ccggaactgggcgacaagttcgcctcccggcacggtcagaagggcgtcgtcggccacatc
gcgccccaggaggacatgcccttcaccgaacagggcgtcgtcccggacctgatcatcaat
ccgcacgcgctgccctcgcggatgaccgtcgggcacatcctcgagatgatcggcgggaag
gtcgggtccctagagggacggagagtggacggcaccgccttcaccggcgaggacgaggac
gaactccgcggctcgctggaggagcacgggttcatgtccagcggcaaggagatcatgtac
tcgggcatcacgggcgagcagatcgaggcggagatcttcctcgggaccatcttctaccag
aagctctaccacatggtctcgaacaagatccacgcccgctcgcgcggcccggtgcaggtc
ctgacccgccagccgaccgaggggcgcgcccgcgagggcggcctgcgcgtcggcgagatg
gaacgggacgtgctcatcggtcacggggccgcgatggcgctgaaggagcggctgctcgac
gagtccgaccgcgagttcatcaacgtctgcggcgagtgcgggatgacggcggtcgagaac
gtcgaacaacggcgtgtctactgccccaactgcgacgaggagaccgagattcacgaggtc
gagatgagctacgcgttcaagctcctgctcgacgagatgaaggcgctcggtatcgcgccg
cgcatcgaactggaggacgcagtctaa
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