Halosimplex pelagicum: HZS54_15350
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Entry
HZS54_15350 CDS
T06697
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS54_15350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpel03021
]
HZS54_15350
Transcription machinery [BR:
hpel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS54_15350
Prokaryotic type
Archaeal type
TFB
HZS54_15350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cas12f1-like_TNB
Zn_ribbon_RRN7
A2L_zn_ribbon
Auto_anti-p27
DUF5817
Motif
Other DBs
NCBI-ProteinID:
QLH82918
UniProt:
A0A7D5PD24
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All DBs
Position
3068851..3069840
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AA seq
329 aa
AA seq
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MTSTNQRVTGRHVQPVERTDEGTESGTESERERDECPECGAAGITDEKRGETVCQECGVV
LEEDVVDRGPEWRSFDARDKAQKSRVGSPTTEMLHDKGLSSVIDWQNKDANGQTLSARKR
EQMSRLRTWDERFRSQSAQDRNLKQALGEIDRMASALGIPKDARETASVIYRRALDEELI
PGRSIEAMATGSLYAGARQAGVPRTLDELETVSRVDRKEFARAYRYIARELELAMEPTDP
AQYVPRLVSDLNLSEETKQRAVELLEAGKREAVHSGKNPVGLAAAAIYAAGRLTNVEVTQ
HEVADAADVSAVTIRDRYTELLDADDRAA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcacgaaccagcgagtcacgggccggcacgtccagcccgtcgaacgcacggac
gaggggaccgaatcggggaccgagtcggagcgcgagcgcgacgagtgtccggagtgcggt
gcggcgggcatcaccgacgagaagcggggcgagacggtctgccaggagtgcggcgtcgtg
ctggaggaagacgtggtcgaccgcggccccgagtggcggtcgttcgacgcccgcgacaag
gcccagaagagccgcgtcgggtcaccgacgaccgagatgctccacgacaaggggctgtcg
tcggtcatcgactggcagaacaaggacgccaacggccagacgctctcggcgcgaaagcgc
gaacagatgtcccggctgcgcacctgggacgagcggttccgctcccagagcgcccaggac
cgcaacctcaagcaggcgctgggcgagatcgaccgcatggcgagcgcgctgggcatcccg
aaggacgcccgcgagaccgccagcgtcatctaccggcgcgcgctcgacgaggaactcatc
cccggccggtccatcgaggcgatggccactgggtcgctgtacgccggcgcccggcaggcc
ggcgtcccgcgcacgctcgacgaactcgagaccgtcagtcgcgtcgaccgcaaggagttc
gcacgcgcgtacaggtacattgcacgcgaactcgaactcgcgatggagccgaccgacccc
gcccagtacgtcccgcgactggtctcggacctgaacctgtccgaggagaccaaacagcgg
gcggtcgagctgctcgaggccggcaagcgcgaggcggtccactccgggaagaacccggtc
ggactcgccgcggcggccatctacgcggccggccgactcaccaacgtggaggtgacccag
cacgaggtcgccgacgccgccgacgtgtccgcggtgaccatccgcgaccgctacaccgaa
ctgctcgacgccgacgaccgggccgcctga
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integrated database retrieval system
