Halosimplex pelagicum: HZS54_16100
Help
Entry
HZS54_16100 CDS
T06697
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS54_16100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpel03021
]
HZS54_16100
Transcription machinery [BR:
hpel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS54_16100
Prokaryotic type
Archaeal type
TFB
HZS54_16100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
Cyclin_C
DUF8106
DZR
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
DZR_2
Zn_ribbon_3
Cyclin_N
A2L_zn_ribbon
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QLH83052
UniProt:
A0A7D5TUA1
LinkDB
All DBs
Position
3223321..3224295
Genome browser
AA seq
324 aa
AA seq
DB search
MTDTTIRRHTSEREEARERDEGESEALVCPECGGNLASDAEHGETVCEDCGLVVEEDEID
PGPEWRAFDASEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREKMQRLR
TWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEG
VATSALYAAARQAGTPRSLDEIAAVSRVDKDEIARTYRYVVRELSLEIQPADPESYVPRF
VSDLDLPDEVERRARQLLNTAKEQGVHSGKSPVGLAAAAVYAASLLANEKVTQSEVSEVA
NISEVTIRNRYHELLEAEEEFTAP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacaatcagacgccacacgagcgaacgcgaagaggcccgcgagcgagac
gagggggagtccgaggcgctcgtctgtccggagtgtgggggcaacctcgcgtcggacgcg
gagcacggcgagacggtctgcgaggactgtggcctcgtcgtcgaggaggacgagatcgac
cccggaccggagtggcgcgccttcgacgccagcgagaaagacgagaaatcgcgcgtcggc
gcgccgacgacgaacatgatgcacgacaagggcctctcgaccaacatcggctggcaggac
aaggacgcctacggcaactccctgtcctcgcgccagcgcgagaagatgcagcggctgcgc
acctggaacgagcggttccgcacccgcgactccaaggagcgtaacctcaagcaggcgctc
ggtgagatcgaccgcatggcctccgcactaggcctgccagagaacgtccgcgagaccgcc
tccgtgatctaccgccgcgcgctcgacgaggacctgctcccgggtcgctcgatcgaaggc
gtggccacgtcggcgctgtacgccgccgcccgccaggccggcacgccgcgcagcctcgac
gagatcgcggcggtctcccgcgtcgacaaggacgagatcgcacggacctaccgctacgtg
gtccgcgagctctcgctggagatccagcccgccgaccccgagagctacgtgccgcggttc
gtctccgacctcgatctgcccgacgaggtcgaacggcgcgcgcgccagctgctgaacacg
gccaaagagcagggcgtccactccgggaagtccccggtcggcctggccgccgcggccgtc
tacgccgcctccctgctcgccaacgagaaggtcacccagagcgaggtcagcgaggtggcc
aacatctccgaggtcaccattcgaaatcgctaccacgagctcctcgaggccgaagaggag
ttcaccgccccctga
DBGET
integrated database retrieval system
