Halosimplex pelagicum: HZS54_20200
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Entry
HZS54_20200 CDS
T06697
Name
(GenBank) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS54_20200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpel03000
]
HZS54_20200
03021 Transcription machinery [BR:
hpel03021
]
HZS54_20200
Transcription factors [BR:
hpel03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HZS54_20200
Transcription machinery [BR:
hpel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HZS54_20200
RNA polymerase III system
TFIIIB
HZS54_20200
RNA polymerase I system
SL1/TIF-1B
HZS54_20200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
QLH83809
UniProt:
A0A7D5TDI3
LinkDB
All DBs
Position
4027766..4028167
Genome browser
AA seq
133 aa
AA seq
DB search
MTTSGVTPDALRDQLDAAGMDFNTGDSTGYAALNNALNLNAIAIGLGLENIVYDPEQFPG
LIYHVDRPQVTLVLFGNGVITAINGDTDQEVRDAITTAVKRGAELGLIEDDSVPDVNVDA
ETFPIPDEIEVGE
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcaggtgtcacaccggacgcacttcgagatcaacttgatgccgccgggatg
gatttcaataccggtgattcgacagggtatgctgcgttgaataacgcgctcaatttaaac
gcaattgcgattggattaggtttggagaacatcgtctatgacccggaacaattccccggt
ctgatttaccacgtagaccgtccacaggtaactctagtgctgttcggcaatggtgtaatc
acagcgatcaatggagacacagatcaagaagtccgggacgctatcacaactgcggttaag
aggggtgcagaactcggtcttattgaggacgattcggtaccagatgtgaatgttgatgcc
gagacgttcccgatcccggacgaaatcgaagttggggagtag
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integrated database retrieval system