Halosimplex pelagicum: HZS54_20860
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Entry
HZS54_20860 CDS
T06697
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS54_20860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpel03021
]
HZS54_20860
Transcription machinery [BR:
hpel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS54_20860
Prokaryotic type
Archaeal type
TFB
HZS54_20860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Trm112p
DUF7573
Zn_Ribbon_YjdM
Sigma70_r4
Cas12f1-like_TNB
Zn_ribbon_LysW
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
QLH83933
UniProt:
A0A7D5TDH3
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All DBs
Position
4184445..4185416
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AA seq
323 aa
AA seq
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MERPSRQRERVESEEKEDEQADEQAEQQQCPECESSALVTSADGGEIVCEDCGLIIDEGN
IDRGPEWRAFNHSERQEKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSLSSEKRSQMHR
LRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALDEDLIRGRSI
EGVATACLYAACRQEDIPRSLEEVSEVSRVEQKEIGRTYRYVAQELSLKMEPVDPKQYVP
RFVSELELSEEVQAKANEIIDVTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVAD
VAQVTEVTIRNRYQEQIEAMGIH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaacggccgagccgccagcgcgagcgcgtggagtccgaggaaaaagaggacgaacaa
gcggacgagcaggccgaacagcagcagtgtcccgaatgcgagtcgtccgcgctcgtgacg
agcgccgacggcggggagatcgtctgcgaggactgcggactgatcatcgacgagggcaac
atcgaccgcggaccggagtggcgggcgttcaaccacagcgagcgacaggagaaatcgcgg
gtcggcgcgccgacgacccagacgatgcacgacaaggggctgaccacccagatcgactgg
aaggacaaggacgcctacggtcgctccctgtcctcggagaagcgctcgcagatgcaccgc
ctgcggaagtggcaggagcgcatccgcaccaaggacgccggcgagcgcaacctccagttc
gcgctctcggagatcgaccgcatggcgagcgcgctgggcgtgcctcggtccgttcgagag
gtcgcgtcggtcatctatcgtcgcgcgctcgacgaggacctcatccgcggccgctccatc
gagggcgtcgccaccgcctgcctctacgccgcctgccgccaggaggacatcccgcgctcg
ctcgaggaggtctcggaggtctcccgcgtcgagcagaaggagatcggccgcacctaccgc
tacgtcgcccaggaactcagcctgaagatggagccggtcgaccccaagcagtacgtcccc
cgcttcgtctccgagctcgaactcagcgaggaggtccaggccaaggccaacgagatcatc
gacgtgaccgccgagaagggcctgctgtcgggcaagtccccgaccggctacgccgccgcc
gccatctacgccgcctcgctgctgtgcaacgagaagaagacacagcgggaggtcgccgac
gtggcccaggtcaccgaggtcaccatccggaaccggtatcaggaacagatcgaagcgatg
ggcatccactga
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