Halosimplex pelagicum: HZS54_21015
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Entry
HZS54_21015 CDS
T06697
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HZS54_21015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpel03019
]
HZS54_21015
Messenger RNA biogenesis [BR:
hpel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HZS54_21015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-ProteinID:
QLH83962
UniProt:
A0A7D5PD98
LinkDB
All DBs
Position
4218194..4219270
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AA seq
358 aa
AA seq
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MQVNDRHPTTEGRERVTLVPESLDDLWHLTYIVEPGDRVSGDTTRRIQRNDDDMRDTGGE
REHMWVEIEVDDVEFAKFANRLRVGGVIVDCSREDQLDFHHTLNVEPFEELEVEKVWKPD
QDDRLNEAVEATENPDVAIATVEEGEAHVHTVAQYGTEERASITGPTGKAAWGDGSRPRE
ELFEELGTVLARMDVEAIILAGPGFTKQDALDYIEENERDLADRITTVDTTGVGDRGVHE
VLKRGAVDEVQTQTRISAEADLVDELTERIATGSEVAYGPDQVAEAADFGAIDQLLVLDE
RLRAERGDEGEWEIDVDAVIETTEQKGGEVTVFSGEFDPGQQLRNLGGIAALLRYRID
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcaacgaccgtcacccgacgacggagggtcgggagcgggtcaccctcgtcccg
gagagcctggacgacctctggcatctcacctacatcgtcgagccgggcgaccgcgtctcc
ggcgacacgacgcggcgcatccagcgcaacgacgacgacatgcgcgacaccggcggcgag
cgcgaacacatgtgggtcgagatcgaggtcgacgacgtggagttcgccaagttcgccaac
cgcctgcgcgtcggcggcgtcatcgtcgactgctcgcgggaggaccagctggacttccac
cacacgctcaacgtcgagcccttcgaggagctggaggtcgagaaggtctggaagcccgac
caagacgaccgcctgaacgaggccgtcgaggcgaccgagaaccccgacgtggccatcgcc
accgtcgaggagggcgaggcccacgtccacaccgtcgcccagtacgggaccgaggagcgc
gcctcgatcaccggcccgaccggcaaggccgcgtggggcgacggctcccgaccccgcgag
gagctgttcgaggagctggggacggtcctcgcccggatggacgtggaagcgatcatcctc
gccggccccggcttcacgaagcaggacgcgctggactacatcgaggagaacgagcgggat
ctggccgaccggatcacgaccgtcgacaccacgggcgtcggcgaccgtggcgtccacgaa
gtcctgaagcgcggcgccgtcgacgaggtccagacccagacgcgcatctccgcggaggcc
gacctggtcgacgagctgaccgagcgcatcgcgaccggatcggaggtcgcctacggcccc
gaccaggtcgccgaggcggccgacttcggcgccatcgaccagttgctcgtcctcgacgag
cgcctgcgcgccgagcgcggcgacgagggcgagtgggaaatcgacgtcgacgccgtcatc
gagaccactgagcagaagggcggcgaggtgaccgtcttctccggcgagttcgaccccggc
cagcagctgcgcaacctcggcggcatcgcggcgctgctgcgctaccgcatcgactga
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