Halosimplex pelagicum: HZS54_23575
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Entry
HZS54_23575 CDS
T06697
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hpel
Halosimplex pelagicum
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpel03000
]
HZS54_23575
Transcription factors [BR:
hpel03000
]
Prokaryotic type
Helix-turn-helix
Other families
HZS54_23575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_4
PAS_9
PAS
HTH_10
PAS_3
PAS_8
GAF_2
GAF
GAF_3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QLH84438
UniProt:
A0A7D5PEA5
LinkDB
All DBs
Position
complement(4707479..4709497)
Genome browser
AA seq
672 aa
AA seq
DB search
MSRNVEPQGWEWGDAAAANAVDESFAEVVGETVFSELLVASAPECFLVADDEGRIVFANP
AVESVFGYDPEALVDRSLRSLIPDRFRAAHREAFRSYLDTGQRTVDWNDLRLVGRHCEGH
EVPLAVWFREFAHRGEQYFVGVVRDISTRVEQRGELASERAFVESMFDALPDVVYAFDPE
GRMLRWNDRLNEVTGYSDDGIESRDPFDFLADDDHGRIATAISCVLSAGRVVTVESDLVT
ADGETIPYEFTGAPLVTDGEVVGVTGVGRDISERKRYEATLERLDDLNTVIRSVDRALVE
ATTRGEIAREVCSRLVGEGAYCGAVIGSVDADGGAIDVDAAAGLGESMAEAAGDGFADGA
PSSVAAAIESESVQVVDGVTSDFREAVDGGGDRTIAVVPLVADDRRFGLLAVCTDRVHGI
PDRERAVLGELGATIGNAVQSALTRQLLHSDTITEIELRATDDDVPFVAVSAAADCRLEL
ERAVTFGDEHVFFFSVDGASTEAVREAAASVSSISNVAALTDERIELRAAQGTITSVLTD
LGARTTAGVADRGAATITAELPSDAAVREAVDAVQSAYPDTELVARREAERSLRTPSELR
QGLAADLTDKQQAALEAAYFSGYFEWPARTSDAGGVADTLDIAPQTFHQHLRVAERKLLA
ALFDGAGPEGSR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgaaacgtcgagccacaggggtgggagtggggcgacgcggcggcggccaacgcg
gtcgacgaatcgttcgccgaggtcgtcggggagacggtgttttcggagctgctcgtggcg
agcgcgccggagtgtttcctagtcgccgacgacgaggggcggatcgtcttcgcgaacccc
gcggtcgagtcggtcttcgggtacgacccggaggcgctggtcgaccggtcgctgcggtcg
ctgatacccgaccggttccgggccgcccaccgcgaggcgttccggtcgtatctggacacc
ggccagcggaccgtcgactggaacgacctgcggctggtcggccgtcactgcgagggccac
gaagtcccgctcgcggtgtggttccgcgagttcgcccaccgcggcgagcagtacttcgtg
ggcgtggtgcgcgacatctcgacgcgagtcgagcagcgcggcgaactggcgagcgagcgg
gcgttcgtcgagagcatgttcgacgcgctgccggacgtggtgtacgcgttcgacccagag
gggcggatgctgcgctggaacgaccgactgaacgaggtgaccggctacagcgacgacggg
atcgagtcgagggacccgttcgacttcctggccgacgacgaccacggccggatcgccacg
gccatctcgtgcgtcctctcggcgggccgcgtcgtgacggtcgagtccgacctcgtcacc
gccgacggggagacgatcccctacgagttcacgggcgcgccgctggtgaccgacggcgag
gtggtcggagtgaccggcgtcggtcgcgacatctccgagcggaagcgctacgaggcgacg
ctggagcgcctggacgacctcaacacggtgatccggtcggtcgaccgggcgctcgtcgag
gcgacgacgcgcggggagatcgcccgcgaggtctgttcgcgactggtcggcgagggcgcg
tactgcggcgcggtgatcggctccgtcgacgccgacggcggcgcgatcgacgtggacgcc
gccgcggggctcggggaatcgatggccgaagcggccggcgacgggttcgcggacggcgcg
ccgtcgtcggtcgccgccgcgatcgagtcggagtcggtgcaggtcgtcgacggcgtgacg
agcgacttccgcgaggcggtcgatgggggcggcgaccggacgatcgcggtcgtcccgctc
gtcgccgacgaccgacggttcgggctgttggccgtctgtaccgacagggtccacgggatc
ccggaccgcgagcgggcggttctgggcgagctgggtgcgacgatcggcaacgccgtccag
tcggcgctgacccgccagctgttgcactcggacacgatcacggagatcgagcttcgggcg
accgacgacgacgtgccgttcgtcgccgtctccgcggcggccgactgccggctcgaactc
gaacgggcggtgacgttcggcgacgaacacgtcttcttcttctccgtcgacggcgcctcg
acggaggcggtacgcgaggcggcggcctccgtctcgtcgatctcgaacgtcgccgcgctg
accgacgagcggatcgagctccgcgcggcccaggggacgatcacgtcggtgctgaccgac
ctcggcgcgcggacgacggcgggcgtcgccgaccggggggcggcgacgatcacggcggaa
ctcccctccgacgcggcggtccgcgaggccgtcgacgccgtgcagtcggcgtatcccgac
accgaactggtcgcccgtcgcgaggccgagcggtcgctgcggacgccctcggagctccgc
cagggtctcgcggcggacctgacggacaaacagcaggccgcgctggaggcggcgtacttc
tcgggctacttcgagtggcccgcgcggaccagcgacgccggcggggtcgccgacacgctc
gatatcgcccctcagacgttccaccagcacctcagggtcgccgagcggaagctcctggcg
gcgctgttcgacggcgccgggccggaggggagccgctga
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