Halosimplex pelagicum: HZS54_24375
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Entry
HZS54_24375 CDS
T06697
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hpel
Halosimplex pelagicum
Pathway
hpel03030
DNA replication
hpel03420
Nucleotide excision repair
hpel03430
Mismatch repair
hpel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZS54_24375
03420 Nucleotide excision repair
HZS54_24375
03430 Mismatch repair
HZS54_24375
03440 Homologous recombination
HZS54_24375
03460 Fanconi anemia pathway
HZS54_24375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpel03000
]
HZS54_24375
03032 DNA replication proteins [BR:
hpel03032
]
HZS54_24375
03400 DNA repair and recombination proteins [BR:
hpel03400
]
HZS54_24375
Transcription factors [BR:
hpel03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HZS54_24375
DNA replication proteins [BR:
hpel03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HZS54_24375
DNA repair and recombination proteins [BR:
hpel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HZS54_24375
MMR (mismatch excision repair)
HZS54_24375
DSBR (double strand breaks repair)
HR (homologous recombination)
HZS54_24375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
QLH84584
UniProt:
A0A7D5PCE2
LinkDB
All DBs
Position
complement(4864796..4866292)
Genome browser
AA seq
498 aa
AA seq
DB search
MGAIEEVYADLDTDVSEEEFREAVEQKVEQMGGLADEETAAMLIAHELNEGEVDTVADIE
PGMEEVKFLAKVVSIGELRTFERDGEDEDGRVVNVEAADETGNVRLAFWDKEAEAITEGM
LEEGQVLRIAGRPKDGYNGLEVSVDKAEPDDDAEIDVELGDGSTVDALTMGQSDVNVRGI
VLETDSIRTFDRDDGSEGKVSNLLLGDETGRVRVTMWDDRADRATELDPGTAVEVVDGYV
REREGDLELHVGDHGAIDEIDETVEFTPEADAIGSVEMDQVVDLAGVVRSADPKRTFDRD
DGSEGQVRNIRVQDDTGDIRVALWGEKADKEIAPGDEVFVADAEIQDGWQDDLEASAGWQ
STVVVLDEDTGAGSAAPSPGGAGGASGGDSGSGDSSGADAGLGAFTGEGDADGGTADASD
AGGSAGAASGGSADGGAAAAAAEEVEFTGTVVQTGDPVILDDGQETMQVETDAALTLGQE
VTARGAVVDDRLDADDVF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgatcgaggaggtctacgcggatctcgatacggacgtctccgaggaggagttc
cgcgaggccgtcgaacagaaggtcgagcagatgggcgggctggcggacgaggagacggcg
gcgatgctgatcgcccacgagctcaacgaaggggaggtcgacaccgtcgcggacatcgaa
ccgggcatggaggaggtgaagttcctcgcgaaggtggtctcgatcggcgagttgcgcacg
ttcgaacgggacggcgaggacgaggacggccgcgtcgtcaacgtcgaggcggccgacgag
accggcaacgtccgcctcgcattctgggacaaggaggccgaagccatcaccgagggcatg
ctcgaagaggggcaggtcctccggatcgccggccgaccgaaggacgggtacaacggcctc
gaagtctccgtcgacaaggccgaacccgacgacgacgccgagatcgacgtggagcttggc
gacgggtcgaccgtcgacgcgctgacgatgggccagtccgacgtgaacgtccgcgggatc
gtcctagagaccgactcgatccggacgttcgaccgcgacgacgggagcgaggggaaggtg
tcgaacctcctgctgggcgacgagaccggccgcgtacgcgtgacgatgtgggacgaccgc
gccgaccgcgcgacggagctcgacccggggaccgccgtcgaggtggtcgacggctacgtc
cgcgagcgggagggcgacctcgaactacacgtcggcgaccacggcgccatcgacgagatc
gacgagacggtcgagttcacgccggaggccgacgccatcgggagcgtcgagatggaccag
gtggtcgacctggcgggggtcgtccggtcggccgaccccaagcggaccttcgaccgcgac
gacggcagcgagggacaggtccggaacatccgcgtgcaggacgacacgggcgacatccgc
gtggcgctgtggggcgagaaggcggacaaggagatcgcgccgggcgacgaggtgttcgtg
gccgacgccgagatccaggacggctggcaggacgacctggaggcgtcggcgggctggcag
tcgaccgtggtcgtcctcgacgaggacaccggggcgggttcggccgcgccgtcgcccggt
ggcgccggcggcgcgagcggcggcgatagcgggagcggcgattcgagcggcgcggacgcc
gggctcggcgcgttcaccggcgagggcgacgcagacggcggtaccgcggacgcgagcgac
gccggcgggtccgccggagcggcgtccggcgggagcgccgacggcggggcggcggcggcc
gcggcggaggaggtggagttcacggggacggtcgtccagacgggcgacccggtgatcctc
gacgacggccaggagacgatgcaggtcgagaccgacgcggcgctgacgctcgggcaggaa
gtgaccgcccgcggcgcggtggtcgacgaccgcctcgacgccgacgacgtgttctga
DBGET
integrated database retrieval system
