Helicobacter pylori F30: HPF30_0003
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Entry
HPF30_0003 CDS
T01895
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00540
Lipopolysaccharide biosynthesis
hpf01100
Metabolic pathways
hpf01250
Biosynthesis of nucleotide sugars
Module
hpf_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPF30_0003 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
HPF30_0003 (kdsA)
Enzymes [BR:
hpf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HPF30_0003 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
Lipid A
HPF30_0003 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF3657
Motif
Other DBs
NCBI-ProteinID:
BAJ56100
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All DBs
Position
complement(909..1739)
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AA seq
276 aa
AA seq
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MKTSKTKTPKSVLIAGPCVIESLENLRSIATKLQPLANNERLDFYFKASFDKANRTSLES
YRGPGLEKGLEMLQTIKDEFSYKILTDVHESYQASAAAKVADILQIPAFLCRQTDLIVEV
SQTNAIINIKKGQFMNPKDMQYSVLKALKTRDKSIQSPTYETALKNGVWLCERGSSFGYG
NLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFAPILARAAAAVGIDGLFA
ETHVDPKNALSDGANMLKPDELEHLVADMLKIQNLF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttctaaaacaaaaacccctaaatccgttttaatcgctggcccatgcgtcatt
gagagcttagaaaatctaagaagtatcgctactaaattacaacccctagccaacaacgag
cggttggatttttattttaaagcgagttttgataaggcgaaccgcacgagtttagagagt
tacagagggcctggtttagaaaaaggcttagaaatgttacaaaccatcaaagatgaattt
agctataaaattttaaccgatgtgcatgaaagctatcaagcaagcgcagcggccaaggta
gcggatattttacaaatcccggcgtttttgtgccgccaaacggatctgattgtagaagtg
agccaaactaacgccattatcaatatcaaaaaagggcaattcatgaacccaaaagacatg
caatattccgttctaaaagcccttaaaacgagagataaaagcattcaaagccccacttat
gaaacagcgttaaaaaatggcgtgtggctgtgtgaaagggggagcagctttgggtatggg
aatttagtggtggatatgcgctctttaaaaatcatgcgagagtttgcccctgtgattttt
gacgctactcatagcgtgcaaatgccagggggagcgaacgggaaaagttcaggagacagc
tcttttgcccctattttagccagagctgcggctgcggtggggattgatgggctgttcgct
gaaacgcatgttgatcctaaaaacgctctaagcgacggagcaaacatgctaaaacctgac
gagctagaacatttagtggctgacatgttaaaaatccaaaatttattttaa
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