Helicobacter pylori F30: HPF30_0007
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Entry
HPF30_0007 CDS
T01895
Symbol
hopZ
Name
(GenBank) outer membrane protein
KO
K15845
outer membrane protein HopZ
Organism
hpf
Helicobacter pylori F30
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
PLU-1
EspB_PPE
Motif
Other DBs
NCBI-ProteinID:
BAJ56104
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Position
complement(5074..7116)
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AA seq
680 aa
AA seq
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MVKNTGELKRLSDTYENLSNLLNNFNNLNQAVTNANSPSAINAAIDNLKANTQGLLNEKT
NSPAYQAVSLALNATVGLWNVIGYAIMCGNGNGTESGPGSVVFNNQPGSGTTSITCNRFE
STGPGKSMSIDEFKKLNKAYQIIQQALKEGNGFPDLGSNGQKVSVTYEYECKQIASINDG
VNKFCQAKNSSSSSSGNGNSTTTTTQDGVTITTTYSNNKATVTFDTTNNAQNLLAQANNI
MNVLNTQCPLIRSTTSEDAPGGGQPWGIQTNGNACKVFQQEFSAVTSMIKNAQEIVTQAQ
TLNTSQQNNQNAPQDFNPYTSSDRAFAQNMLNHAQAQAKMLELADQIKTNLGTIPSKFVT
NYLASCRTDGTTPNQGVTSNTWGAGCAYVEETITALDNSLAHFGTQAEQIKQSELLARTI
LDFRGSLSNLNNTYNSITTTASNTPNSPFLKNLISQSTNPNNPEGLKTVYQLNQSAYSQL
LSATQELGHNPFRRIGLISSQTNNGAMNGIGVQIGYKQFFGEKKRWGARYYGFFDYNHAY
IKSSFFNSASDVFTYGVGTDVLYNFINDKATKNSKISFGVFGGIALAGTSWLNSQYVNLA
TFNNFYSAKMNVANFQFLFNLGLRMNLAKNKKKASDHAAQHGVELGVKIPTINTNYYSLL
GTQLQYRRLYSVYLNYVFAY
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaacaccggcgaattgaaaaggctttcagacacttatgaaaacttgagcaat
cttttaaacaattttaacaatctcaatcaggcggtaacgaacgcaaacagcccttcggca
atcaacgctgcgatcgataatttaaaagcaaacacgcagggtttattgaacgaaaaaacc
aactccccggcgtatcaagccgtctctttagctcttaatgcgacggtggggttgtggaat
gtcatcggctatgccatcatgtgtgggaacggcaatggcacagagagcggtcctggcagc
gtggtttttaataaccaaccaggaagcggaacaacgagtattacttgcaaccgctttgaa
tcgactggtcctggtaaatccatgtctattgatgaattcaagaaactcaataaagcctat
caaatcatccaacaagctttaaaagaaggaaacgggtttcctgatttaggtagcaatggc
caaaaagtaagcgtaacatatgagtatgaatgtaagcagattgctagcatcaacgacggt
gtgaataaattctgtcaagctaaaaactctagtagctctagtagcggtaatggtaatagc
acaaccacgaccacgcaagacggcgtaacgatcaccactacctatagtaataataaagcc
accgtcacgtttgacaccaccaataacgctcaaaatcttttagctcaagcgaacaacatc
atgaatgtccttaacacgcaatgcccgctgatacgctccacgactagcgaagacgctcca
gggggcggccaaccatggggcattcaaacgaatgggaacgcatgtaaagtcttccaacaa
gaatttagcgcggttactagcatgatcaaaaacgcccaagaaatcgtaacgcaagctcaa
acccttaacactagccagcaaaacaatcaaaacgcgccacaagatttcaatccttacacc
tcttctgatagggctttcgctcaaaacatgctcaatcacgcgcaagcgcaagccaagatg
cttgaactagccgatcaaatcaaaaccaatcttggcactatcccaagcaaatttgtcaca
aattacttggcatcatgcagaacagatggcacaacgcctaatcaaggggttacttctaac
acttggggagccggttgcgcctatgtagaagagacgataacggctttagataacagcctt
gcgcattttggcactcaagccgagcaaatcaagcagtctgagttgcttgcacgcactata
cttgattttagaggcagccttagcaatttaaacaacacttataacagcatcaccacgacc
gcttcaaacacgcctaattccccattccttaaaaatttgataagccaatccactaaccct
aataaccccgaaggcttaaagaccgtttatcaactcaaccaaagcgcttattcgcaatta
ttaagcgccacgcaagaattagggcataatcctttcagacgcattggattaatcagctct
caaaccaacaacggcgcgatgaatgggatcggtgtgcaaatagggtataaacaatttttt
ggtgaaaagaaacgatggggggctagatattacggcttttttgattacaaccatgcttat
atcaaatccagctttttcaattcagcctctgatgtgttcacttatggggtaggaacagat
gtcctctataactttatcaatgataaagccaccaaaaacagcaagatttcttttggggtg
tttgggggtatcgccttagccggcacttcgtggcttaattctcaatatgtgaatttagcc
acattcaataatttctatagcgctaaaatgaatgtggcgaatttccaattcttattcaat
ttaggcttgagaatgaacctcgctaagaataagaaaaaagcaagcgatcatgcggctcag
catggcgtggaattaggtgtgaagatccccacgatcaacaccaattactattctttgcta
ggcactcaactccaataccgcaggctttatagcgtgtatctcaactatgtgtttgcgtat
tga
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