Helicobacter pylori F30: HPF30_0008
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Entry
HPF30_0008 CDS
T01895
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPF30_0008 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpf03019
]
HPF30_0008 (groEL)
03110 Chaperones and folding catalysts [BR:
hpf03110
]
HPF30_0008 (groEL)
03029 Mitochondrial biogenesis [BR:
hpf03029
]
HPF30_0008 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpf04147
]
HPF30_0008 (groEL)
Enzymes [BR:
hpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HPF30_0008 (groEL)
Messenger RNA biogenesis [BR:
hpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HPF30_0008 (groEL)
Chaperones and folding catalysts [BR:
hpf03110
]
Heat shock proteins
HSP60 / Chaperonin
HPF30_0008 (groEL)
Mitochondrial biogenesis [BR:
hpf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HPF30_0008 (groEL)
Exosome [BR:
hpf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPF30_0008 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HPF30_0008 (groEL)
Exosomal proteins of breast cancer cells
HPF30_0008 (groEL)
Exosomal proteins of colorectal cancer cells
HPF30_0008 (groEL)
Exosomal proteins of bladder cancer cells
HPF30_0008 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAJ56105
LinkDB
All DBs
Position
complement(7518..9158)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENTEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLDLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcaaattttcagatagtgcaagaaaccttttatttgaaggcgtgaga
caactccatgacgctgtcaaagtaaccatggggccaagaggcaggaatgtgttgatccaa
aaaagctatggcgctccaagcatcaccaaagatggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtagctaacatgggcgctcaactcgttaaagaagtagcgagcaaaacc
gctgatgctgccggcgatggcacgaccacagcgaccgtgcttgcttatagcatttttaaa
gagggcttgagaaacatcacggctggggctaaccctattgaagtgaaacgaggcatggat
aaagccgctgaagccattattaatgagcttaaaaaagcgagcaaaaaagtaggcggtaaa
gaagaaatcacccaagtagcgaccatttctgcaaactccgatcacaatatcgggaaactc
atcgctgacgctatggaaaaagtgggtaaagacggcgtgatcaccgttgaagaagctaag
ggcattgaagatgaattagatgtcgtagagggcatgcaatttgatagaggctatctctcc
ccttactttgtaacaaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctagcatgaaagacattctcccgctactagaaaaaaccatg
aaagagggcaaaccgcttttaatcatcgctgaagacattgagggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggggacagaagaaaagaaatgctcaaagacatcgctgttttaaccggcggtcaagtcatt
agcgaagaattaggcttgactttagaaaacactgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagccatgat
gtcaaagacagagtcgcgcaaatcaaaacccaaattgcaagcacgacaagcgattatgac
aaagaaaaattgcaagaaagattggccaaactctctggcggtgtggctgtgattaaagtg
ggcgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggttgatgacgcgttgagc
gcgactaaagcggctgttgaagaaggcattgttattggcggcggtgcggccctcattcgc
gcggctcaaaaagtgcatttggatttacacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctatcaatgccggttatgatggcggt
gtggtcgtgaatgaagtgcaaaaacacgaagggcattttggttttaacgctagcaatggc
aagtatgtggacatgtttaaagaaggcattattgaccccttaaaagtagaaaggatcgct
ttacaaaatgcggtttcggtttcaagcttgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcaaccccagcaatgcctgatatgggtggcatgggcggtatggga
ggcatgggtggcatgatgtaa
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