KEGG   Helicobacter pylori F30: HPF30_0015
Entry
HPF30_0015        CDS       T01895                                 
Symbol
comB4
Name
(GenBank) hypothetical protein
  KO
K12053  ComB4 competence protein
Organism
hpf  Helicobacter pylori F30
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpf02044]
    HPF30_0015 (comB4)
Secretion system [BR:hpf02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPF30_0015 (comB4)
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 P-loop_TraG AAA_29 nSTAND3 TraG-D_C RsgA_GTPase AAA_22 AAA_23 AAA_16 AAA_10 ABC_tran AAA_7 DUF5727 ResIII T2SSE PduV-EutP Death_3 Mg_chelatase SMC_N
Other DBs
NCBI-ProteinID: BAJ56112
LinkDB
Position
14152..16515
AA seq 787 aa
MLEKLLSAIKQKVSNYFLGVLPKSYSMSEENNILGLYDEHFLLTKNENLVGILRLEGVSY
THLSTEQLQDLFTERQMALDSLEKVVARLVVKRRKMDHQQNIQSDSKYLQAILNQFENKE
VYENQYFLVLESAHSLQGVLEHKKKSLMHANRENFKDILSYKAHFLQETLKSLEIQLKNY
APKLLSSKEVLNFYAEYINGFDLHLKPLVGGYLSDSYIASSITFEKDYFIQESFNQKTYN
RLIGIKAYESERITSIAIGALLYQETPLDIIFSIEPMSVNKTLSFLKERAKFSMSNLVKN
ELLEYQELVKTKRLSMQKFALNILIKAPSLEDLDAQTSLVLGFLFKENLVGVIETFGLKG
GYFSFFPERIHLNHRLRFLTSKALACLMVFERQNLGFKANSWGNSPLSVFKNLDYSPFLF
NFHNQEVSHNNAKEIARVNGHTLIIGATGSGKSTLISFLMMSALKYQNMHLLAFDRMQGL
YSFTKFFKGHYHDGKSFSINPFCLEPNLQNLEFLQSFFLSMFDLAPSRDKEALEDMNAIS
CAIKSLYETLYPKAFSLLDFKETLKRTSSNQLGLSLEPYLNNPLFNALNDAFNSSAFLNV
INLDAITQNPKDLGLLAYYLFYKILEESRKNDSGFLVFLDEFKSYVENDLLNAKINALIT
QARKANGVVVLALQDIYQLSGVKNAHSFLSNMGTLILYPQKNARELKHHFNVPLSETEIS
FLENTPLYARQVLVKNLGNGSSNMIDVSLEGLGRYLKIFNSDSSHVNKVKALQKDYPKEW
REKLLKS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgttagaaaagcttttgagcgccatcaaacaaaaagtttcaaactattttttaggagtt
ttgcctaaaagctattctatgagcgaagaaaacaacattttaggcttgtatgatgagcat
ttcttactcactaaaaacgaaaacttagtgggcatcctccgtttagaaggggtgagttac
acccatttaagcacagagcaattgcaagatcttttcaccgagcgccaaatggcgttggat
tctttagaaaaagtcgtggcacgccttgtggttaaaaggcgtaaaatggatcaccaacaa
aacattcaatctgactctaaatacttgcaagcgattttgaatcaatttgaaaataaagaa
gtgtatgaaaatcagtattttttagttttagaaagtgcgcattctttacagggcgtttta
gagcataagaaaaaatctcttatgcatgccaatagggaaaattttaaggacattctctct
tataaagcgcattttttgcaagaaactttaaaaagcttagaaatccagctcaaaaactac
gcccccaaactcttaagctctaaagaggttttgaatttttatgcggaatacattaacggg
tttgacctccatttaaaacccctagtaggggggtatttgagcgacagctatatcgctagt
tctatcacttttgaaaaagattatttcattcaagaaagctttaatcaaaaaacctataac
cgcttgattggcattaaagcttatgagagcgagcgcatcacttctatagcgatcggagcg
cttttataccaagaaacgcctttagacattatcttttctatagagcctatgagcgtcaat
aaaacgctgagttttttaaaagagagggccaagtttagcatgtccaatctcgttaaaaac
gagctgctagaataccaagaactggtcaaaaccaaacgcctatccatgcaaaaattcgcc
ctaaacattcttatcaaagcccctagtttagaggatttagacgctcaaacaagcttagtt
ttagggtttttatttaaagaaaacttagtgggcgttatagaaacttttggcttaaaaggg
gggtatttttcctttttccctgaacgcatccacttaaaccaccgtttgcgttttttaacc
tctaaagccctagcgtgtttaatggtgtttgaaaggcaaaatttaggttttaaggctaat
tcatgggggaatagccctttgagcgtgtttaaaaatttggattattccccttttttattc
aatttccacaaccaagaagtgagccacaacaacgctaaagaaatcgccagagtgaatggg
catactctaatcataggggctactgggagcggtaaaagcacgctgattagctttttaatg
atgagtgctttgaaataccaaaacatgcaccttttagcatttgataggatgcaagggctg
tattctttcacaaaattttttaaagggcattaccatgacggcaaatcttttagcattaat
cccttttgcttagagcctaatttgcagaatttagaatttttgcaatccttctttttgagc
atgtttgatcttgccccttcaagggataaagaagccttagaagacatgaatgcgatttct
tgcgcgattaagagcctttatgagactttataccctaaagcttttagtttgctagatttt
aaagaaacgcttaaaagaacctcatctaaccaattgggtttgagtttagagccgtatttg
aataaccccctttttaacgctttgaatgacgcgttcaactcaagcgcttttttaaatgtg
ataaacctagatgccatcacccaaaaccctaaagacttagggcttttagcctattatttg
ttttataaaatcttagaagaatccaggaaaaacgacagcggttttttggtttttttagac
gagtttaaatcctatgtggagaacgatttattgaacgctaaaattaacgctttaatcacg
caagccagaaaagctaatggtgtggtggtgttggctttgcaagacatttaccaattaagc
ggggttaaaaacgcccatagttttttaagcaacatggggactcttattttgtacccgcaa
aaaaacgctagggagttgaaacaccacttcaatgtgcctttgagcgaaactgaaatttct
tttttagaaaacacccctttgtatgccaggcaggttttagtcaaaaatctgggtaacggg
agttctaacatgattgatgtgagtttggagggtttggggcgttatttgaaaatctttaat
tcagactctagccatgtgaataaagtgaaagcgttacaaaaagactaccctaaagagtgg
cgtgagaaacttttgaagagctag

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