Helicobacter pylori F30: HPF30_0065
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Entry
HPF30_0065 CDS
T01895
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HPF30_0065 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpf03016
]
HPF30_0065 (trmU)
Enzymes [BR:
hpf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HPF30_0065 (trmU)
Transfer RNA biogenesis [BR:
hpf03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HPF30_0065 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
Diphthami_syn_2
DUF7411
ThiI
Asn_synthase
THF_DHG_CYH
Arginosuc_synth
Spore_III_AA
NAD_synthase
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
BAJ56162
LinkDB
All DBs
Position
67641..68669
Genome browser
AA seq
342 aa
AA seq
DB search
MKIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLYIKNTQKACEFLGIPLE
VLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDYALKLGCEKIATGHYAR
VKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNAMPFLGT
LETYKESQEICFVEKSYIDTLKKHVEVEKEGVVKNLQGEIIGTHKGYMQYTIGKRKGFSV
KGALEPHFVVGIDAKKNELIVGKKEDLATHSLKAKNKSLTKDFKSGEYFIKARYRSVPAK
AFVSLRDEAIEVEFEEPFYGVAKGQALVVYKDDILLGGGVIV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcggtattactcagtgggggggtggatagctcttatagcgcttatagctta
aaagagcaagggcatgaattagtggggatttatttgaaactccatgcgagcgaaaaaaag
catgatttatacattaaaaacactcaaaaagcgtgcgagtttttaggcattcctttagag
gtgttggattttcaaaaggattttaaaagcgcggtttatgatgaatttatcagcgcttat
gaagaagggcaaaccccaaacccttgcgcgttgtgcaaccctttaatgaagtttgggcta
gctttagattatgctttaaaattagggtgtgaaaagatcgctaccgggcattatgcgaga
gtcaaagaaattgacaaggtaagctatattcaagaggctttggataaaactaaagatcag
agctattttttatacgctttagagcatgaagttatcgctaaattggtgttccctttaggg
gatttattaaaaaaggatattaagcctttagccttgaatgcgatgccttttttaggcact
ttagagacttataaggaatctcaagaaatctgctttgtggaaaaaagctacattgacact
ttaaaaaagcatgttgaagtggaaaaagagggcgtggtgaaaaacctgcaaggcgaaatc
attggcacgcataagggctatatgcaatacacgattggcaaacgcaaaggctttagtgtt
aaaggcgcattagagccgcattttgtggtggggattgacgctaaaaagaacgagttaatt
gtgggcaaaaaagaagatctcgccacgcattcgcttaaggctaaaaacaaatctttaacg
aaagattttaaaagtggcgaatattttatcaaggcccgttacaggagcgtgcctgctaaa
gcgtttgtgagcttgagagatgaggcgattgaagtggagtttgaagagcctttttatggc
gtggctaaagggcaagccttagtcgtttataaagatgacatcttgcttggtgggggcgtg
attgtttaa
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