Helicobacter pylori F30: HPF30_0107
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Entry
HPF30_0107 CDS
T01895
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPF30_0107 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpf03021
]
HPF30_0107 (rpoA)
03400 DNA repair and recombination proteins [BR:
hpf03400
]
HPF30_0107 (rpoA)
Enzymes [BR:
hpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPF30_0107 (rpoA)
Transcription machinery [BR:
hpf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPF30_0107 (rpoA)
DNA repair and recombination proteins [BR:
hpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPF30_0107 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
HHH_5
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
BAJ56204
LinkDB
All DBs
Position
95785..96819
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLSSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMGKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKSVKNMG
KKSYDEIAEKLNDLGYPVGTELNPEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgttagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggctcttgcttttaagctctgtggggtatgctcctgtaggtttaaag
attgaaggcgtccatcatgagtttgactcattaagaggggttactgaagatgtgtcgctt
ttcatcatgaatttaaagaatatccgctttatagctaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggaacttagg
gctagggatttgagttctgaacatatagaaatcgtcaatcctgaaatgcctctagccaca
attaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagtgaaaacacaagggaattgatgcctgagggctacatgccactagacggctctttc
acgccgattaaaaatgtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgggcaagcaactgggcgtttttggcgaaagacccattgct
aatacggaatattcaggcgattacgcccaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagagcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaaaccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
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