Helicobacter pylori F30: HPF30_0223
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Entry
HPF30_0223 CDS
T01895
Symbol
hofH
Name
(GenBank) outer membrane protein HofH
Organism
hpf
Helicobacter pylori F30
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_OMP_2
Motif
Other DBs
NCBI-ProteinID:
BAJ56320
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All DBs
Position
complement(225920..227335)
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AA seq
471 aa
AA seq
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MKKASQVLLFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNIL
QSDDLATQNMKHNQNVRNYVFSDAYLEYAYKNYFEIKAGRYLSTMPYKSGQTQGFQVSGQ
YKHARLTWFSSFGRAFAFGSFLLDWYAARTTYSGGFTKNDKGGYDSHGQKVLYGTHAVQL
TYKPHRFLIEGFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVK
SDGSPVYKYDTPATQNGQNLIIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMS
GNSVYAGFTGTALKRDAATILLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLGYKF
NEYLSGSIDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTVLVASF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcaagtcaggttctactctttggagcatttttaagctcttcgttacaaggt
tttgaagctaagctcaatggctttgtggatcaatccagcactatcggttttaaccagcat
aaaatcaataaagaaagaggcatctaccctatgcagcaattcgcaacgattgcgggctat
ttagggcttggttttagcctgttacccaaaaaggtttcagaccatgttctaaaaggcaaa
atagggggcatggtgggatctattttctatgacggcacgaagaagtttgaagacggatct
gtggcttacaatctctttggttattacgatgggttcatggggggttatacaaacatctta
caaagcgatgatttagcaacacaaaacatgaaacacaaccaaaatgtccgcaattatgtc
tttagcgatgcgtatttagaatatgcctataaaaattattttgaaataaaagccggacgc
tatttatccactatgccttataaaagcggtcaaacgcaaggctttcaagtttctgggcaa
tacaagcatgcgcgcctgacttggtttagctcttttgggagggcgttcgcttttggatcg
tttctattggattggtatgctgcgcggaccacttatagtgggggctttaccaaaaacgat
aaagggggttatgatagccatgggcaaaaggtgctttatggcacgcatgcggtgcaactc
acctataaacctcatcgtttcctcatagaaggcttttactacctctcgcctcaaatcttt
aacgctccgggcattaagattggctgggactctaaccccaattttagcggcacaggcttt
cgctcagatacgagcatcacagggtttttccccatttactacccttggatgatcgttaaa
tccgatgggagtccggtctataaatacgacacgcctgccactcaaaacgggcaaaacctc
attatccgccaacgctttgatataaacaattacaatgtttccatcgctttttataaagtc
tttcaaaacgctaatggttggataggcaatatgggtaatccaagcggtgtgataatgtca
ggtaacagcgtgtatgctggttttacaggcacagcccttaaaagagacgccgctaccatt
ctcctttcttgtggcggcactcattttgccaaaaaattcacatggaaattcgccacgcaa
tactccaattcagtggtctcttgggaagcaagagcgatgatctctttaggctataaattc
aatgaatatttgagcggcagcatcgatctttcatattatggcgtgcatactaacaaaggc
tttaaaccgggtgaaaacgggcctgtgcctaaaaacttccctgccctttattctgacagg
agcgcgttatacacggtcctagtagcatcattttga
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