Helicobacter pylori F30: HPF30_0384
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Entry
HPF30_0384 CDS
T01895
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00540
Lipopolysaccharide biosynthesis
hpf01100
Metabolic pathways
Module
hpf_M00866
KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPF30_0384 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
HPF30_0384 (waaA)
Enzymes [BR:
hpf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HPF30_0384 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HPF30_0384 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
HPF30_0384 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
HPF30_0384 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
Lipid A
HPF30_0384 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
BAJ56481
LinkDB
All DBs
Position
404981..406162
Genome browser
AA seq
393 aa
AA seq
DB search
MFKFFYLLFLTLGHLLGAPFIFFWSFKEKYRHSLKARFFLKDNFLKSEPIFWFHACSYGE
VKSLEPIIQALKEPILISVTTNTGFELAAQTYQNLEHIEVCYLPFETLLFAWKKNLKRLK
TLVVTEAELWFNVFDTAQKLGAKTMLINARISVRSYPKYQRFSFFYALLFKRIDLVLAQS
KDDKKRLLNLGAKKVVDFLNIKRFSKPVIASFYPKNPSALNIVLASTHEGEEELGLKAFL
EFKKTHENARLIVVPRHPERFKSVQNLLQDVLKTTPFSLECFSSKGFVECDVLLVDRLGE
LNNFYPIADIVILGGSFVKMGGHNPLEPAFFNARLITGEYIFNQVALFELVKPYKIVQKE
DLLDALLDYKNLGVARFLENGHDLNELLAFIKH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaagtttttctaccttttatttttaactttggggcatcttttgggtgcgcctttc
atctttttttggagttttaaagaaaaataccgccattctttaaaagctcgttttttcctc
aaagacaattttttaaaaagcgagccgattttttggtttcatgcatgctcttatggggag
gtcaaatccttagagccaatcattcaagctttaaaagagccgattttaattagcgttacc
actaataccggttttgaattagccgctcaaacttaccagaatttggagcatatagaagtg
tgttacctgccttttgaaaccctattatttgcatggaaaaaaaacttaaaacgcttaaaa
actttggtggttacagaagcggaattgtggtttaatgtgtttgatacggctcaaaaatta
ggggcaaaaaccatgctcattaacgctcgcatcagcgttcgttcttaccctaaataccag
cgtttttcttttttttatgcgcttttattcaaacgcattgatttggttttagcgcaaagc
aaggacgataaaaagcgcttgttgaatctaggggcaaaaaaagtggtggattttttgaat
atcaagcgtttttcaaagcctgtaatcgcttcgttttaccctaaaaacccaagcgcttta
aacattgttttagccagcacgcatgagggcgaggaggaattagggttaaaagcgtttttg
gagttcaaaaagacgcatgaaaacgcaaggctaattgttgtgccgcgccaccctgagcgt
tttaaaagcgtgcaaaatttattgcaagatgttttaaaaacgacgccttttagtttggag
tgtttttcttcaaaaggttttgtggaatgcgatgttttgttagtggatcgcttgggggaa
ttgaataatttctatccaatcgcagatattgtcattttagggggttcgtttgtcaaaatg
ggggggcataaccctttagagccggcgttttttaatgcgcgcttgatcacaggggagtat
attttcaaccaagtagcgttgtttgaattagtcaagccttataaaatcgttcaaaaagag
gatctgttagacgctcttttagattacaaaaatttaggcgtggcgcgttttttagaaaac
gggcatgatttaaacgaattgctcgcattcattaaacattaa
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