Helicobacter pylori F30: HPF30_0415
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Entry
HPF30_0415 CDS
T01895
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpf
Helicobacter pylori F30
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpf03016
]
HPF30_0415 (truD)
Enzymes [BR:
hpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPF30_0415 (truD)
Transfer RNA biogenesis [BR:
hpf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPF30_0415 (truD)
Prokaryotic type
HPF30_0415 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAJ56512
LinkDB
All DBs
Position
complement(433821..434966)
Genome browser
AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNPSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTHNLQERNLKVLSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGPQRFGKFNDNHQEG
LKILQNQTKFTHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSVKENLEFFKQKNLN
INPNTLKTLKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFAENITSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaatcctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaatttagcaac
acaggcgaacatgccgttatccaagtgagaaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaagaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgcataatttgcaagaaagaaaccttaaagtcctgtctttgaattaccat
cataataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaagactgaacaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggcccgcaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcacccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagtgtcaaagaaaatttagaattttttaaacaaaaaaatttaaat
atcaatccaaacaccctaaaaacccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgcacctacggggttattagatggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataatctttta
aatagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgcagaaaatata
acttctcaatatgtgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaaacatgagaaaggagaaaataatgacgaa
ttttga
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