Helicobacter pylori F30: HPF30_0474
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Entry
HPF30_0474 CDS
T01895
Symbol
gmhD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00541
Biosynthesis of various nucleotide sugars
hpf01100
Metabolic pathways
hpf01250
Biosynthesis of nucleotide sugars
Module
hpf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPF30_0474 (gmhD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
HPF30_0474 (gmhD)
Enzymes [BR:
hpf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HPF30_0474 (gmhD)
Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
Core region
HPF30_0474 (gmhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
KR
FCSD_central
Motif
Other DBs
NCBI-ProteinID:
BAJ56571
LinkDB
All DBs
Position
510885..511877
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AA seq
330 aa
AA seq
DB search
MRYIDDELENQTILITGGAGFVGSNLAFYFQENHPKAKVIILDKFRSNTLFNNNRPSSLG
HFKNLIGFKGEVVIADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLDQELVMKTNYQAFL
NLLEIARQKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNI
QVGLRYFNVYGPREFYKEKTASMVLQLALGIMAFKEVKLFEFGEQLRDFVYIEDVIQANV
KAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQNHTQAHIEPTIL
DLDYTPLYDLGSGIKDYLPHIHAIFKEQHA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattgatgatgaattagaaaatcaaacgattttaatcaccggtggggctggc
tttgtgggcagtaatctggccttttattttcaagagaaccaccctaaagctaaagtaatc
attttggataagtttcgcagtaacacgctcttcaataataaccgccccagttccttaggg
cattttaagaatttaatcggttttaagggtgaggtggttatcgctgatattaacaacccc
ttagatttaaggcgtttagaaaaattgcattttgattatttgttccaccaagccgctgtc
tctgatacgaccatgctggatcaagaattagtgatgaaaaccaactaccaggctttttta
aaccttttagaaatcgctcgccaaaaaaaagctaaagtgatttacgcttcttcagcgggc
gtttatggcaacaccaaagcccctaatgtggtaggcaaaaacgaaagccctgaaaatgtt
tatggcttttccaagctttgcatggacgaatttgtcctctctcattcaaatgacaatatt
caagtgggcttaaggtattttaatgtctatgggcctagggaattttataaagaaaaaacc
gcttctatggttttgcaactcgccttaggcataatggcgtttaaggaagtcaagcttttt
gaatttggcgagcaattaagggattttgtctatattgaagatgtgatccaagcgaatgtg
aaagcgatgaaggctcaaaaaagcggggtttataatgtgggttattctcaagccagaagt
tataatgaaatagttagcattttaaaagagcatttaggggattttaaagtaacttatatc
aaaaacccttacgctttcttccaaaatcacacccaagcgcatattgaacccactattttg
gatttagactacacccctttatacgatttaggaagcggtattaaagattatttgccccat
atccatgcgatttttaaagaacagcatgcatga
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