Helicobacter pylori F30: HPF30_0596
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Entry
HPF30_0596 CDS
T01895
Symbol
ddl
Name
(GenBank) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00470
D-Amino acid metabolism
hpf00550
Peptidoglycan biosynthesis
hpf01100
Metabolic pathways
hpf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPF30_0596 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPF30_0596 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPF30_0596 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpf01011
]
HPF30_0596 (ddl)
Enzymes [BR:
hpf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HPF30_0596 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpf01011
]
Precursor biosynthesis
Amino acid ligase
HPF30_0596 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_TupA
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BAJ56693
LinkDB
All DBs
Position
complement(629014..630057)
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AA seq
347 aa
AA seq
DB search
MEFCVLFGGASFEHEISIVSAIALKEVLKDRIKYFIFLDENHHFYLVEESNMHSKYFAQI
KEKKLPPLILTRNGLLKSSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKTLDYVLLNEKNRANALDLIGFNFPFIIKPSNAGSSLG
VSVVKEEKELIYALDGAFEYSKEVLIEPFIQEVKEYNLAGCKIKKDFCFSYIEEPNKQEF
LDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGALIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtggaattttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgcgcttaaagaagtgctaaaggataggattaaatattttatttttttagatgag
aaccatcatttttatttggttgaagaatccaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattaccccccctaatccttacacgcaatggtttgcttaagagctcgttt
ttaggcgctaagattatagaattgcctttagtgatcaatcttgtgcatgggggcgatggc
gaagatgggaaattagcgagcttgttagaattttatcgtatcgcttttataggtcctagg
attgaagcgagcgtgttgagttataacaaatatttaaccaagctttacgccaaagactta
ggggtaaagactttagattatgttcttttgaatgaaaaaaatcgcgctaacgctctagat
ttgattggctttaattttcctttcatcatcaagcccagtaacgccgggagctctttaggg
gtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacggcgcgtttgaatat
tctaaagaggtcttaatagagcctttcattcaggaagtgaaagaatacaatttagccggc
tgcaagatcaaaaaggatttttgtttttcttatattgaagagcctaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcaataaagcccctaaagcgaatctt
tctaacgccctagaagagcaattgaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgcttattcgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggccaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcgcaatcattacccaaaacccctaaaatcccaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa
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