Helicobacter pylori F30: HPF30_0600
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Entry
HPF30_0600 CDS
T01895
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpf
Helicobacter pylori F30
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpf03009
]
HPF30_0600
Enzymes [BR:
hpf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPF30_0600
Ribosome biogenesis [BR:
hpf03009
]
Prokaryotic type
ribosomal protein modification factors
HPF30_0600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
BAJ56697
LinkDB
All DBs
Position
632342..633661
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AA seq
439 aa
AA seq
DB search
MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKRGAILIVSGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
NLVLKGYRDMTFIAQDSSSFLYDKGQKDGLIQLIKAIDKQQALKSARILYLYPSSTTLEL
IGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKECFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNNSFKALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELTTPLKPGHYT
IMPSAFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagaaaataaacaactctgcttaatttcattaggttgctctaaaaatttg
gtggattcagaggtgatgttaggcaagctttataactacacgctcactaatgacactaag
agcgctgatgtgattttgatcaacacttgcggttttattgaaagcgccaaacaagagagc
atccaaaccattctaaacgccgctaaagacaaaaaaaggggggcgattttgattgtgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagaattgatccctgaagtggatatt
tttaccggtgtgggggattatgacaagattgatataatgattgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttgagcgagcattataacgcgcgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattacaaagcagggaattagactccattttaaaagaagtggaa
aatctggtgcttaaaggctatagggatatgacttttatcgctcaagattctagctccttt
ttatacgataaggggcaaaaagacggcttgatccagcttattaaagcgattgacaaacag
caagccttaaagagtgctcgaatcttatacctctacccctctagcaccactttagagctt
attggcgcgattgaaagttcgcccatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaagatgcggcgcaactccagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaatgctttatcaggagcacgatcattgtaggg
catccggaagaaaatgagggcgaatttgaggaattgagcgcgtttttggacgaattccgg
tttgaccggttgaatatttttgctttcagcgctgaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgctcgcattaaagccttgaataaaatcgctcta
aaacaccagaacaattcctttaaggctttgttaaataagcccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatctcaggtgggcgcctgaagtggat
ggggaaatcttaatcaatgacagcgaactaaccacccctttaaaacccgggcattatacg
attatgcctagcgcatttaaagacaatatcttactcgctaaggttttaagccctttttaa
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