Helicobacter pylori F30: HPF30_0612
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Entry
HPF30_0612 CDS
T01895
Symbol
omp17
Name
(GenBank) outer membrane protein
KO
K15848
outer membrane protein SabA
Organism
hpf
Helicobacter pylori F30
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
SabA_adhesion
VBS_C3G9
Motif
Other DBs
NCBI-ProteinID:
BAJ56709
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All DBs
Position
641964..643922
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AA seq
652 aa
AA seq
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MKKRFLLSLSLAASLLCAEDNGFFVSAGYQIGEAVQTVKNTGELKNLNDKYEQLNSYLNQ
VASLKQSIQNANNISLVNSSLNDLKSFTENNYNSTTQSPIFNAVQAVITSVLGFWSLYAG
NYFTFFVGNKDKSADVNGNPPFQTIVKNCSGLENCAMDQTTYDKMKKLAEDLQAAQQNST
TKANNLCALSGCDATQGQNSPNSTVSNALNLAQQLMDLIANTRTAMMWKNIVINGVSNAS
GAINSTGYPTQYAVFNNIKAMIPILQQAVTLSQSNNSLSSKLQAQATGSQTNPEFAKDIY
NLALNQKQVISYAKDIFNLFNSIPAEQYKYLEKAYLKIPNLGQTPTNPYRQVVNLNKEIQ
TIQNNVSYYGNRIDSALSVAKDVYNLKSNQTQIVAAYNGAKNLSQEISQLPYNQVNTKDI
VTLPYDKNAPAAGQYNYQINQEQASNLSQALAAMSNNPFKKIGMISSQSNNGALNGLGVQ
VGYKQFFGESKRWGLRYYGFFDYNHGYIKSSFSNSSFNSSSDIWTYGGGSDLLVNFINDS
VTRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTALNNPYSAKVNTSNFQFLFNLGLRTNLA
TAKKEDSEHSAQHGIELGIKIPTINTNYYSFLGAKLEYRRLYSVYLNYVFAY
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgatttttactttctctatcccttgcggcgtcattactttgcgctgaagac
aatggcttttttgtgagcgcgggctatcaaatcggcgaagcggtgcaaacggtcaaaaac
accggtgaattgaaaaacttgaacgataaatacgagcaattaaactcgtatttaaatcaa
gtggcttcgttgaagcaaagcattcaaaatgccaacaacattagcttggtcaatagctct
ttaaacgatttaaaaagctttaccgaaaacaactataacagcaccacccaatcgcccatc
tttaacgctgtgcaagccgttatcacttcggtattgggtttttggagtctttatgcgggg
aactacttcactttttttgtgggtaataaggataaatccgctgatgtcaatggtaaccct
ccttttcaaacgattgtaaagaactgctcaggacttgaaaactgcgctatggatcaaacc
acttacgacaaaatgaaaaaacttgctgaagacctccaagcagctcaacaaaactctacc
actaaagcgaacaatctttgcgctttatccggatgcgatgcaacacaaggccaaaactca
ccaaactcaaccgtaagcaacgctcttaacttggcgcaacagcttatggatttgatcgca
aacactaggactgctatgatgtggaaaaatatcgtcatcaatggcgtttcaaacgcgtcc
ggcgctatcaattccactggttacccaacgcaatatgcggtgtttaacaacatcaaggcg
atgatacctatcttgcaacaagcggttacgctttctcaaagcaacaacagcctgtctagt
aagttgcaagctcaagctacaggatctcaaacaaaccctgaattcgctaaagacatctac
aatctcgctttaaaccaaaagcaagtcatctcttacgccaaagatattttcaacctcttt
aattccatccctgcagagcagtataaatatctagagaaagcttatttgaaaatacccaat
ttgggtcaaactcctactaacccctacagacaagtggtgaatttgaataaagaaattcag
acgattcaaaacaatgtgagttattatggcaatcggattgattcggctttaagcgtggct
aaagatgtttataacctaaaatccaatcaaacacagattgtagccgcttataacggtgct
aaaaatttgagccaagagatttctcaactcccatacaatcaagtcaatacaaaagacatt
gtcacactaccttatgataaaaacgctccagcagcgggccaatacaactaccaaatcaac
caagagcaagcatccaatctttctcaagctttagcggcgatgagcaataacccctttaaa
aagataggaatgatcagctctcaaagcaataacggcgcattgaatgggcttggcgtgcaa
gtgggctataagcaattctttggcgagagcaaaagatgggggttaaggtattatggcttc
tttgattacaaccacggctatatcaaatcaagcttttctaattcttcttttaattcttct
tctgacatatggacttatggcggtgggagcgatttgttagtgaattttatcaacgatagc
gttacaagaaagaacaacaagctttctgtgggtctatttggtggtatccaactagcaggg
actacatggcttaattctcaatacgtgaatttaaccgcgttaaataatccttacagcgcg
aaagtcaatacttccaatttccaattcttgttcaatctcggtttgagaacgaatctcgct
acagctaagaaagaagacagcgaacattccgcgcagcatggcatagaattgggcattaag
atccctaccatcaacacgaattactattcttttctaggcgctaagctagaatacagaaga
ctctatagcgtgtatctcaattatgtgtttgcttactaa
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