Helicobacter pylori F30: HPF30_0618
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Entry
HPF30_0618 CDS
T01895
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf03030
DNA replication
hpf03430
Mismatch repair
hpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPF30_0618 (dnaX)
03430 Mismatch repair
HPF30_0618 (dnaX)
03440 Homologous recombination
HPF30_0618 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpf03032
]
HPF30_0618 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpf03400
]
HPF30_0618 (dnaX)
Enzymes [BR:
hpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPF30_0618 (dnaX)
DNA replication proteins [BR:
hpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPF30_0618 (dnaX)
DNA repair and recombination proteins [BR:
hpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPF30_0618 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_14
RuvB_N
AAA_5
RCF1-5-like_lid
DNA_pol3_gamma3
EH_Signature
AAA_30
DEAD
AAA_assoc_2
AAA_19
CENP-T_N
Motif
Other DBs
NCBI-ProteinID:
BAJ56715
LinkDB
All DBs
Position
648618..650324
Genome browser
AA seq
568 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPTTILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAFKQEPKIAEKIEKPEKRENAETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAV
FEKNIRFIDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGENIKIALKNHS
ENKSAKEVVKEFKFPSLKPKPTTETTAEMKEKETKEAIEKETKENDTKEIQETQPKETPT
ALQEFMANHSDLIEEIKSEFEIKSVELL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagataaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttctgggaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcacccaatgccaaagcgct
ttaaacaaccaccatatagatattatagaaatggacggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaactg
cccactaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaactattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaactagctcacagcgggcaagggagcttaagagatacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgatcgaagcgttttagaggatttttttcaaagcctaatcaaccaagatgaagcg
cggttgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattccatccttttaata
gagcgcttttttaaaatcattatgagcggtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaagcccttaaaccaa
aacgctaacgcttttaaacaagaacccaaaatcgcagagaaaatagaaaagccagaaaaa
agagaaaacgcagaaaccccgcaaactcccatgctttcagccaaagatcgcatttttcac
aaccttttcaaacaagttcaaacattggtttatgagcgcaactacgaattaggggcggtg
tttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggag
tctttagccacccataaagataaagagcttttaagagagcgttttaaaatcgtgaaaagt
atcgttgatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaaaatcattca
gaaaataaaagcgctaaagaagtggttaaagagtttaaattcccttctttaaagcccaaa
ccaaccaccgaaacgacggctgaaatgaaagaaaaagaaactaaagaagcgattgaaaaa
gaaactaaagaaaatgacactaaagagattcaagaaacccaaccaaaagaaacccctaca
gccttgcaagagttcatggctaaccattctgatctcattgaagagattaagagcgagttt
gaaatcaaaagcgtggaattgttatga
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