Helicobacter pylori F30: HPF30_0638
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Entry
HPF30_0638 CDS
T01895
Name
(GenBank) putative outer membrane protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00540
Lipopolysaccharide biosynthesis
hpf01100
Metabolic pathways
Module
hpf_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPF30_0638
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
HPF30_0638
Lipopolysaccharide biosynthesis proteins [BR:
hpf01005
]
Lipid A
HPF30_0638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
BAJ56735
LinkDB
All DBs
Position
complement(673591..674592)
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AA seq
333 aa
AA seq
DB search
MFFKFILYLLLGMFAWAKEDILTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFS
TKEFDFSKNKAMKWTSYLGFFNKSPRVTRFGISLAQDMYTPSLENRKLVHLHDNHPYGGY
LRVNLNVYNRHQTFMELFTLSLGATGQDSLAAQTQHLIHKWGHDPQFYGWNTQLKNEFIF
ELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNT
AFDGGMPYSDKFSVYFFVGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWR
SFRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttcaaattcattttatatttattattaggaatgtttgcatgggcaaaagaggat
attcttaccccattaacgccctctaaacgctattctatcaatttgatgactgaaaatgat
ggttatatcaacccttacattgatgagtattataccgcaggcaaccaaataggcttttct
actaaagagtttgatttttctaaaaataaagcgatgaaatggacttcgtatttagggttt
ttcaataaaagccctagggttactcgttttggcatttctctcgcccaagacatgtatacc
ccttcacttgaaaacagaaaactggtgcatttgcatgacaaccacccttatggggggtat
ttgagggtgaatttgaatgtgtataaccgccatcaaacttttatggagttattcacgctt
tctttaggcgcaacagggcaagattctttggccgctcaaacgcagcatctcattcataaa
tggggccatgacccccaattttatggctggaacacgcagctcaaaaacgaatttatcttt
gaattgcactaccaattgctcaaaaaagtcccccttttaaagactcgttttttttctatg
gagttaatgcctgggtttaatgtggaattgggtaatgcgagggattatttccaactcggc
tcgctctttagggctgggtataacttggacgctgattatggggtcaataaggtcaatacc
gcttttgatgggggcatgccttatagcgataaattttccgtctatttttttgtaggggct
tttgggcgcttccaaccccttaacatcttcattcaaggcaatagccctgaaactaggggc
attgctaatttggaatactttgtttatgccagtgaaataggagcggctatgatgtggcgc
agctttagggtggcttttacgattaccgatattagtaaaacctttcaatcccagcctaaa
caccaccaaatcggcactttagaattaaattttgccttttga
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