Helicobacter pylori F30: HPF30_0705
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Entry
HPF30_0705 CDS
T01895
Symbol
mutS
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hpf
Helicobacter pylori F30
Pathway
hpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPF30_0705 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpf03400
]
HPF30_0705 (mutS)
DNA repair and recombination proteins [BR:
hpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HPF30_0705 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smr
MutS_V
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BAJ56802
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Position
749544..751853
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AA seq
769 aa
AA seq
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MSDASKRSLNPISMNPPINPMMNNNNTPPKPLEESLDLKEFIALFKTFFAKERDTIALEN
DLKQTFTYLNEVDAIGLPTPKSVKESDLIVIKLTKLGTLHLDEIFEIVKRLRYIVILQNT
FKTFTHLKFHERLNAIVLPPFFNDLIALFDDEGKIKQGANATLDALNESLNRLKKESAKI
IHHYARSKELVPYLVDTQSHFKHGYECLLLKSGFSSAIKGVVLERSANGYFYLLPESAQK
IAQKIAQIGNEIDCCIVEMCQTLSHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLE
FVMPSFTQKKMILENFSHPILKEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLS
KHLIAMKINAHHSIIPYFKEIHAIINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDE
IELGTDADEASSLYKTLLEKLLKQNNQIVITTHHKRLSVLMAENKEVELLAALYDEEKER
PTYTFLKGVIGKSYAFGTALRYGVPHFLIEKAKAFYGEDKEKLNVLIENSSALERELKQK
NELLENALKEQEDLKNAWLLEMEKQKEIFHNKKLELEKSYQQALNLLKSEVASKDTSSMH
KEIHKASEILNKHKTNQEIPQIITSFQANEKARYKNESVLIVQILDKGYYWVETELGMRL
KAHGSLLKKIQKPPKNKFKPPKTTIPKPQKASLRLDLRGQRSEEALDLLDAFLNDALLGG
FEEVLICHGKGSGILEKFVKEFLKNHPKVVSFSDAPINLGGSGVKIVKL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagacgcttcaaaaagatcccttaatccaatctcaatgaaccccccaataaaccca
atgatgaataataataataccccacccaaacccctagaagaaagcctggatttaaaagaa
tttatcgctctttttaaaaccttttttgcaaaagaaagagatactattgctttagaaaac
gatctcaagcaaactttcacttatttaaacgaagtggatgcgatcgggttgcctacccct
aaaagcgtgaaagaaagcgatctgattgtcatcaaactcaccaaattagggacgctccat
ttagatgaaatttttgagattgtcaaacgattgcgctacattgtcattttacaaaacact
tttaaaactttcacgcatttaaaatttcatgaacgccttaacgctattgtcctgccccct
ttttttaatgatctaatcgctttatttgatgatgaaggaaaaatcaaacaaggggctaac
gctaccctagacgctttgaatgaaagtttgaaccgccttaaaaaagagagcgcaaaaatc
attcaccattacgcacgctctaaagagcttgtcccttatttagtggatacgcaaagccac
tttaagcatggttatgaatgccttttattgaaaagcgggttttctagtgcgattaaaggc
gttgtgctagaaaggagcgctaatggctatttctatcttttgcctgaaagcgcgcaaaaa
atcgcacaaaaaatcgcgcaaattggtaatgaaatagattgctgtattgttgaaatgtgt
caaactctaagccatagcttgcaaaaacaccttttatttttaaaattcctttttaaagaa
tttgattttttagacagcttgcaagccagacttaatttcgctaaagcctacaatttagaa
tttgtcatgccaagcttcactcaaaaaaaaatgattttagaaaacttttcgcaccccatt
ttaaaagagccaaagcccttaaatttgaagtttgaaaaatccatgctcgctgttaccggc
gtgaatgcgggcgggaaaaccatgctcttaaaatcgcttttgagcgcggcttttttaagt
aagcatctcattgctatgaaaatcaacgcccatcattccattatcccctattttaaagaa
atccacgccattattaatgacccccaaaacagcgcgaacaatatctctacttttgccggc
agaatgaagcaatttagcgctcttttatccaaagaaaacatgcttttaggcgttgatgaa
attgagctagggactgacgctgatgaagcgagcagtttgtataaaaccctgttagaaaaa
ttgcttaaacaaaacaaccaaatcgttatcaccacgcaccacaaacgcctgagcgtgtta
atggcagaaaataaggaagtggaattactggccgctctttatgatgaagaaaaagaacgg
cccacttacacttttttaaaaggggttattggcaagagttatgcgtttggaaccgctttg
cgctatggcgtgccgcattttttgattgaaaaagcgaaagccttctatggcgaagataag
gaaaaattgaatgttttgattgaaaattctagtgcgttagaaagggaattgaagcaaaaa
aacgaacttttagagaacgctttaaaagagcaagaagatttaaaaaacgcatggcttttg
gaaatggaaaaacaaaaagaaatcttccacaataaaaaattggaattggaaaaatcctac
caacaagccctaaatctcttaaaaagcgaagtcgcttcaaaagataccagctccatgcat
aaagaaatccataaagcgagcgaaattttaaacaagcataaaacaaaccaagagatccca
caaatcataacgagctttcaagccaacgaaaaagcgcgctataaaaatgaaagcgtgctg
attgtgcaaattttagacaagggctattattgggtagaaaccgagcttggcatgcgttta
aaagcgcatgggagtttgttgaaaaaaatccaaaaaccccctaaaaacaaattcaaaccc
cctaaaacaaccattcctaaaccccaaaaagcgagcttgcgtcttgatttaagggggcaa
cgcagtgaagaagccttggatttactagacgcttttttaaacgacgcgcttttagggggc
tttgaagaagtgcttatttgccatggcaaggggagcgggattttagaaaagtttgtgaaa
gaatttttaaaaaaccaccctaaagtggtaagctttagcgatgctcccattaatttaggc
ggtagtggggttaaaatcgttaaattgtag
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