Helicobacter pylori F30: HPF30_1004
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Entry
HPF30_1004 CDS
T01895
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00300
Lysine biosynthesis
hpf00470
D-Amino acid metabolism
hpf01100
Metabolic pathways
hpf01110
Biosynthesis of secondary metabolites
hpf01120
Microbial metabolism in diverse environments
hpf01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPF30_1004 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPF30_1004 (lysA)
Enzymes [BR:
hpf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HPF30_1004 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAJ57101
LinkDB
All DBs
Position
complement(1073240..1074457)
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AA seq
405 aa
AA seq
DB search
MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLARL
ESGADCVSIGEIYRALKAGIKPYKIVFSGVGKSELEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSTFLEPI
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPCGGCKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattccaatttgagtattctctctttgttagccagatta
gagagcggggcagattgcgtttccataggcgagatatatagggctttaaaggccgggatc
aagccttataagatcgtgtttagcggggtgggtaagagcgaattggaaatagagcaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggccaggatttctattaggatcaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcacgtttttagagcctatt
agcgtgcattttcatatcggatcacagcttttagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacgcacaagggattttaaacgcgcttcaaggcttggatttgaccatcatttgtgagccg
ggccgatccatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccttgtggggggtgcaagatctcg
ccttgcgatgtggtaggacctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcac
caaatcagggtgataagaaaaagagaggctttagaagatttgtggcggttagaagaagaa
ggcttgaaaggggtttga
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