KEGG   Helicobacter pylori F30: HPF30_1004
Entry
HPF30_1004        CDS       T01895                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hpf  Helicobacter pylori F30
Pathway
hpf00300  Lysine biosynthesis
hpf00470  D-Amino acid metabolism
hpf01100  Metabolic pathways
hpf01110  Biosynthesis of secondary metabolites
hpf01120  Microbial metabolism in diverse environments
hpf01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HPF30_1004 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HPF30_1004 (lysA)
Enzymes [BR:hpf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HPF30_1004 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BAJ57101
LinkDB
Position
complement(1073240..1074457)
AA seq 405 aa
MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLARL
ESGADCVSIGEIYRALKAGIKPYKIVFSGVGKSELEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSTFLEPI
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPCGGCKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLEEEGLKGV
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattccaatttgagtattctctctttgttagccagatta
gagagcggggcagattgcgtttccataggcgagatatatagggctttaaaggccgggatc
aagccttataagatcgtgtttagcggggtgggtaagagcgaattggaaatagagcaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggccaggatttctattaggatcaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcacgtttttagagcctatt
agcgtgcattttcatatcggatcacagcttttagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacgcacaagggattttaaacgcgcttcaaggcttggatttgaccatcatttgtgagccg
ggccgatccatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccttgtggggggtgcaagatctcg
ccttgcgatgtggtaggacctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcac
caaatcagggtgataagaaaaagagaggctttagaagatttgtggcggttagaagaagaa
ggcttgaaaggggtttga

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