Helicobacter pylori F30: HPF30_1111
Help
Entry
HPF30_1111 CDS
T01895
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00260
Glycine, serine and threonine metabolism
hpf00460
Cyanoamino acid metabolism
hpf00630
Glyoxylate and dicarboxylate metabolism
hpf00670
One carbon pool by folate
hpf00680
Methane metabolism
hpf01100
Metabolic pathways
hpf01110
Biosynthesis of secondary metabolites
hpf01120
Microbial metabolism in diverse environments
hpf01200
Carbon metabolism
hpf01230
Biosynthesis of amino acids
hpf01240
Biosynthesis of cofactors
hpf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPF30_1111 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HPF30_1111 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPF30_1111 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPF30_1111 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPF30_1111 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPF30_1111 (glyA)
Enzymes [BR:
hpf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPF30_1111 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
HrcA
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAJ57208
LinkDB
All DBs
Position
complement(1183479..1184729)
Genome browser
AA seq
416 aa
AA seq
DB search
MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLTIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDRILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAREFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaacgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttgacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttgaccatagaaagggctaaa
aagctttttaattgccagttcgccaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaggattttaggcatggatttaagctgc
ggggggcatttaacgcatggcgctaaagtgagcttaaccggtaagcattatcagagtttt
tcttatggcgtgaatttagatggctatattgattatgaagaagcgctaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaattcagagaaatcgctgatgaagtgggggcgttactattaggcgatatagcccat
gtggcagggcttgtggtaaccggtgagcatgctcatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgtaattgctgctaaagcggtgggatttaaagagaatctaaaaccagaatttaaa
gcttatgcacaattagtgaaatctaacatgcaagttctcgctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttggat
aagccttatagtgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcccggcgaaacgcgtagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagtgcaaggggcatgggagctagagaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggccagtcaattccctgtgtatcaacaacctattttttaa
DBGET
integrated database retrieval system