Helicobacter pylori F30: HPF30_1206
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Entry
HPF30_1206 CDS
T01895
Symbol
topA_2
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpf
Helicobacter pylori F30
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpf03032
]
HPF30_1206 (topA_2)
03400 DNA repair and recombination proteins [BR:
hpf03400
]
HPF30_1206 (topA_2)
Enzymes [BR:
hpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPF30_1206 (topA_2)
DNA replication proteins [BR:
hpf03032
]
Prokaryotic type
DNA Topoisomerases
HPF30_1206 (topA_2)
DNA repair and recombination proteins [BR:
hpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPF30_1206 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
TFIIE_alpha
COR
CAF1-p150_N
Motif
Other DBs
NCBI-ProteinID:
BAJ57303
LinkDB
All DBs
Position
complement(1281082..1282038)
Genome browser
AA seq
318 aa
AA seq
DB search
MKDSVIIIESPNKVEKIKQLTGAEVYATIGHFTNLIGVDIENNFACKFEIKEDKAKKINF
LINACRDKKVYIATDPDRESYGIGYQFYEKIKNVASEIYRAEFHEIAPSGIENGLKNAVL
FSRSNTNLYQSFLGRIASDQVVGFALTSYLRKSLNLSELSAGRVQTPALALICQRDQEIR
DFDKLDGEEKVEYQIQANIVCNEKEVIIRHVRANEKNELVDFKFKGKNEASQFLKDLKDG
LGSMSVLVSLKESLSNKEPKKPFTTSKLLSQASKSLKIPTKEIAQLAQKLFEAGLITYHR
TDSEFLSPEYLKEHEVFF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcgtgattatcattgaaagccctaataaggttgaaaagattaaacaacta
acaggtgcggaagtttatgcaactatagggcattttactaaccttataggcgtagatatt
gaaaataattttgcttgtaagtttgaaatcaaagaagacaaggctaagaaaataaatttt
ttaatcaatgcttgtagggacaaaaaagtctatatcgctactgaccctgatagagagagc
tatggtattggctatcaattttacgaaaaaattaaaaatgtagctagtgaaatttatcgt
gcagaatttcatgagatcgcaccaagcggtattgaaaacggcttaaaaaatgcggtgtta
ttttctcgttctaacactaatttataccaatcatttttaggcaggattgcaagcgatcag
gttgttggatttgctctaacaagctatttaagaaaaagtttaaatcttagtgaattgagc
gctggtagagtgcaaactccagctctagctttgatctgccaaagagatcaagaaataagg
gattttgataagttggatggtgaagaaaaagtagaatatcaaatccaagctaatattgtg
tgcaatgaaaaagaagtgattattaggcatgtaagggcgaatgaaaaaaacgaactagtg
gattttaaatttaaaggcaaaaacgaagcatctcaatttttaaaagatctaaaggacgga
ttagggtctatgagtgttctagtttcattaaaagagagtctatccaataaagaacccaaa
aaacctttcaccacctctaaacttttatcccaagcgagcaaatccttaaaaatacccact
aaagaaatcgcacaacttgctcaaaaactctttgaagctggtctcatcacttatcacaga
actgatagtgaatttttaagtcctgagtatctcaaagaacatgaagtgtttttttga
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integrated database retrieval system
