Helicobacter pylori F30: HPF30_1348
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Entry
HPF30_1348 CDS
T01895
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hpf
Helicobacter pylori F30
Pathway
hpf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPF30_1348 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpf01007
]
HPF30_1348 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpf03016
]
HPF30_1348 (serS)
Enzymes [BR:
hpf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HPF30_1348 (serS)
Amino acid related enzymes [BR:
hpf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPF30_1348 (serS)
Transfer RNA biogenesis [BR:
hpf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPF30_1348 (serS)
Prokaryotic type
HPF30_1348 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
BAJ57445
LinkDB
All DBs
Position
complement(1431160..1432407)
Genome browser
AA seq
415 aa
AA seq
DB search
MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEF
GIKMAQKVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEE
DNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIH
LMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLTNLY
NDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQE
HMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQ
ARRAKIRFKENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgattgataaaaaacttttattgcaagattttgagatggtggctctttctttaaaaaag
cgtaataatgcgatggatgacgaattggagcgcttgcgcgaagtcatcacgcattataaa
aagcaactcattgaattagaaagcttgcaagcctttcaaaacaaggtctctaaagaattt
ggtatcaaaatggctcaaaaagtggatacaagcgatctcaaaaaagagctagaaaacaat
aaaatcaaactgaatgagctttccaaaagcgtgggcgaattggaacaacaaatagattta
aagctttcaataatccctaatctggtggatgaaaaaacccctttaggcgcaagcgaagaa
gacaatatagagattaaaaaaatcttaacccctagaaatttcactttcaaacccaaagaa
cattttgaactcgctcaacaaaatggctggattgattttgaaagcggcgtgaaactcgct
aaaagccgtttttctgtcattaggggttttggggctaaaatttatcgcgcgctcatccat
ttaatgttagattttaatgaaaaaaatggctttgaaatcatctacacgccggcgttagtg
aatgaaaaaatgctttttgggaccgggcaattgcccaaattcaaagaagatgttttcaaa
atagaaaatgaaaatttgtatctgatccccacctctgaagtaacgctcaccaatctatac
aacgacacgattgttagcgttgaaaaactccctattaaaatgaccgcgcacacgccttgt
tttaggagcgaagcagggagcgcgggcaaggacacaagggggatgataagacagcaccaa
tttgataaagtagagctagtggctatcacgcaccctaaagaaagcgatgtcatgcaagag
catatgctagagagcgcgagcgaaattttaaaggctttggaattaccgcaccggtttgtg
caattgtgcagcgcggatttaggctttagcgcgagcaacacgatagatattgaagtgtgg
cttcctgggcaaaattgctacagagaaatcagctccgtgtctaatacgagggattttcaa
gccaggcgcgcaaaaatccgcttcaaagaaaatcaaaaaaaccaattagtgcacacctta
aacggctcttctttagcggtaggcaggacgatggtcgctttaatggaaaaccaccagcaa
gcggatgggagcatccacattcctaaggcgttagaaaaatacctttaa
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