KEGG   Helicobacter pylori F30: HPF30_1407
Entry
HPF30_1407        CDS       T01895                                 
Symbol
hsdR_3
Name
(GenBank) Type I restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hpf  Helicobacter pylori F30
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpf02048]
    HPF30_1407 (hsdR_3)
Enzymes [BR:hpf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HPF30_1407 (hsdR_3)
Prokaryotic defense system [BR:hpf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HPF30_1407 (hsdR_3)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD Med9
Other DBs
NCBI-ProteinID: BAJ57504
LinkDB
Position
1497202..1500183
AA seq 993 aa
MVKTEKEVQKQVIETFKSMGYAYLGDLTKSDNENIDKESLKAWLVKNQKINDKRWQRIEH
EINKALTNDLYEANQEFYELLIYGVKTKISQNEPTTQTSWLIDWKDVSKNEFSVAEEVSV
KGQNMKRPDVVLYVNGIALGVLELKNSSVSVESAIRQNLDNQKKEFIRDFFKTIQLVMAG
NESQGLRYGVIETKEKHYLSWKEEGVQKNLFETIECFLKKERFLEFIHDFLIFDKGQKKC
ARFHQYFAIKKMQEFIHKKEGGIIWHTQGSGKSLTMVWLTQWLRKNIKQARILIVTDRRE
LDAQIQGVFERMGEAIYRADSKKDLLSVLFENKEFLVGSLVHKFDDNDLGDLKKQPVLKE
WIVLVDECHRTQSGKLHNAMKSLLPNAIFIAFSGTPLLKQDKKTSQEVFGNYIHCYKFNE
AVSDKVVLDLNYEARSVDQYVSSPEKLDEYFELKTQNLNDAAKTELKKKWANLQKVFSTK
NRLEHIVQDIVLDMVKLPRLKNGKGNAMLVAESVYNACRYFELFLETELKDKVAVITSYE
PNITDLKDCGSNESEESYKYRAYCKMLQNFFNEKDEKKALNKTKEFEEEVKKRFINEPSR
MKLLIVVEKLLTGFDAPSLTYLYIDKKMKDHELFQAVCRVNRLDGEDKDFGCIIDYSDLF
DSLQEVHSDYTNGAFENYEREDIQGLISNKAQKIKKKLEEARDQLRSLCESVKEPKDETG
YIAYFCGSDLEKNAQKRRLFYQLVGAFLRMFVELNNLEKPIYSKEEMQKIKQEAQFYRHL
QKMIGLNSGDSVDLKSYSEDMCRILDAYIKATDSKTLIKIEDQGLCEVLAQMDINDFHKE
LSQVFKNESSMAESIANNTRKRIIEKEASDPKYYKKLSSLLNDLINQFREKKLTYLEYLQ
QIRNLAKQVIHKEDKDYPKKINTNALKTLYNNLDQNEALALEIDACIRANKKDGWVGHNQ
KEKNLKIALRKIINDEGLLENIFNLAKHIDEYY
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggtgaaaacagaaaaagaagttcaaaaacaagtcatagaaacttttaaaagcatgggc
tatgcgtatttgggggatttaacaaagagcgataatgaaaacattgataaagaaagtttg
aaagcatggctagttaaaaaccaaaaaatcaatgataaaaggtggcaaagaattgagcat
gaaatcaataaggctttaacaaacgatttatacgaagcgaatcaagaattttatgagctt
ttaatttatggtgtaaaaaccaaaataagccagaatgaaccaacaacccaaacaagttgg
ctcattgattggaaagatgtttctaagaatgaatttagcgtggctgaagaagtgagcgtt
aaggggcaaaacatgaaacggccggatgtggtgctttatgttaatgggatcgctttaggg
gtgctagaattaaaaaattccagcgtgagcgtagaaagcgctatcaggcagaatttagac
aaccaaaagaaagaatttattagagatttttttaaaacgatccaattggttatggcgggc
aatgaaagtcaagggctaagatatggcgtcatagaaactaaagaaaaacactacctttct
tggaaagaagagggcgttcaaaaaaatttgtttgagacgattgaatgctttttaaaaaaa
gaaaggtttttagaatttatccatgattttttgatttttgataaggggcaaaagaaatgc
gccagattccatcagtattttgcgattaaaaaaatgcaagaatttatccacaaaaaagaa
ggggggattatctggcacacgcaaggcagcggtaagagtcttactatggtgtggcttact
caatggctaagaaagaatatcaaacaagcgaggattttaatcgttacagacaggagagaa
ttagacgctcaaattcaaggcgtgtttgagagaatgggtgaggctatttatcgcgccgac
agcaagaaggatttattgagcgtgctgtttgaaaataaggaatttttggtcggatcgctt
gtgcataagtttgatgacaacgacttaggagatttaaaaaagcaacctgttttaaaagaa
tggattgttttagtggatgaatgccacagaacccaaagcggcaaattgcacaacgccatg
aaaagcctgctccctaatgcgatttttatcgcttttagcggcacgcctttgttgaaacaa
gataaaaagacaagccaggaagtgtttgggaattatatccattgctataaatttaatgaa
gccgttagcgataaagtggtgttagatttaaattatgaagccaggagcgtggatcaatat
gtcagtagccctgaaaagctagacgaatattttgaattaaaaacccaaaacttgaatgat
gcggctaaaacagagcttaaaaagaaatgggctaatttgcaaaaagttttttccactaaa
aacagattggaacacattgtgcaagatattgtgttggatatggtaaaactcccaagatta
aagaatggaaaggggaatgccatgctagtggctgaaagcgtgtataacgcatgccggtat
tttgaactctttttagaaacagaattaaaggataaggtggctgtgatcacaagctatgaa
cccaatattaccgatcttaaagattgcgggagcaatgagagcgaagagagttacaaatac
cgcgcttattgcaaaatgctgcaaaacttttttaatgaaaaagatgagaaaaaagccctt
aacaaaaccaaagagtttgaagaagaagttaaaaagcgttttattaatgagccttctaga
atgaagctattgatcgtggtggagaagctattgaccggttttgatgcaccaagcctcact
tatttatacattgataagaaaatgaaagatcatgagctttttcaagcggtgtgcagggtg
aatagactggatggcgaagataaggattttggctgtatcatagactatagcgatttgttt
gacagcctgcaagaagtgcacagcgattacactaatggggcgtttgaaaactatgaaaga
gaagacattcaagggcttatctccaacaaagcccaaaagattaagaaaaaattagaagag
gctagagatcaattgagatcgctttgtgaaagcgtgaaagagccaaaagatgaaacgggt
tatatcgcttatttttgcgggagcgatttagaaaaaaacgctcaaaaaaggcggttgttt
taccagcttgtgggcgcgtttttaagaatgtttgtggaattgaacaatctagaaaagccc
atttattctaaagaagaaatgcaaaaaatcaaacaagaagcgcaattttataggcactta
caaaagatgattggcttaaatagtggggatagcgtggatttaaaaagctatagcgaagac
atgtgcaggatcttagacgcttacattaaagccacagatagcaagacgctaattaaaata
gaagatcaagggctgtgcgaagttttagcccaaatggatattaatgattttcataaggag
ctttctcaagtatttaaaaatgaaagctctatggcagaaagcatcgctaacaacactaga
aaacgcattatagaaaaagaagcgagcgatcctaagtattacaaaaaattatcttcgctt
ttaaacgatttgatcaaccagtttagagaaaagaaattaacctatttagaatacttgcaa
caaatccgcaatttagctaagcaagttatccataaagaagataaagattaccctaaaaag
atcaacactaacgctttaaaaaccctctataataatttagatcaaaacgaagccttagcc
ctagaaatagacgcatgcataagggctaataaaaaagatggttgggtggggcataaccaa
aaagaaaaaaaccttaaaatcgctttaagaaaaatcataaacgatgagggtttgttggaa
aacatctttaatttagccaaacacatagatgagtattattaa

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