Helicobacter pylori G27: HPG27_108
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Entry
HPG27_108 CDS
T00777
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpg
Helicobacter pylori G27
Brite
KEGG Orthology (KO) [BR:
hpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpg03032
]
HPG27_108 (topA)
03400 DNA repair and recombination proteins [BR:
hpg03400
]
HPG27_108 (topA)
Enzymes [BR:
hpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPG27_108 (topA)
DNA replication proteins [BR:
hpg03032
]
Prokaryotic type
DNA Topoisomerases
HPG27_108 (topA)
DNA repair and recombination proteins [BR:
hpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPG27_108 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Lar_restr_allev
DUF7575
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
ACI26877
UniProt:
B5Z9P7
LinkDB
All DBs
Position
123873..126083
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASITYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRKIDMFKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDRER
EIKAFKPLTYFTLDAYFESHLEAQLISYKGNKLKAQELIDEKKAQEIKNELEKESYTISS
IVKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARAKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALK
DYLKPEELRLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
VKQTENTNDGANQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNAKEIIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCNFLSNHKPINKRCEKCHYLMSERIYRKKKAH
ECIKCKECMFLEEDNG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattattgtagaatccccagcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaagggcatgttagggatttatccaaattcgct
ttaggcattaagattgatgaaacaggctttacccctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagagctttctaaaaaagcatctattacttatatcgct
accgatgaagacagagagggggaagcgataggttatcatgtggcatgtttgattgggggg
aaattggagagctatcctaggattgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgaaaaattgacatgtttaaggtcaatgcccaacaagccaggcgt
tttttagatcgaatcgtgggttttaagctcagttcgttgatttcatcaaagatcactaaa
ggcttgagcgctgggcgggtgcaaagcgcggctttaaagcttgtgattgatagagaaagg
gaaatcaaagcctttaagcctttaacctacttcacgctagacgcttattttgagtcgcat
ttagaagcgcaactcattagctataagggcaacaaactcaaagcccaagagcttattgat
gaaaaaaaagcccaagagattaaaaatgaactggaaaaagaaagctacactatctctagt
atcgttaaaaagtctaaaaaatcccccacaccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttatatgaaggcgtagccaccccacaaggggttatgggggtgatcacttacatgagaacc
gatagcttgaatatcgctaaagaggctttagaagaagcgagagctaagattttaaaagac
tatggcaaagactacctaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattattttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaggctctatactttaatttacaaacgctttttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaggctagtgggagaaagctcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaatgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcacgctattcagaagcgagcttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttccctc
ttgcaaaacagagactatattaaggtagaaaaaaagcaaatcagcgctttagagagcgcg
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaggaattggataatatcgctcaaaataaagccgactaccagcaagtc
ttaaaggacttttactacccttttatggataaaattgaagccgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggtggggaattagtc
aaaaaaaatagccgttatggggagtttatcgcttgcaacaattaccctaaatgcaaatac
gtcaaacagactgaaaataccaatgatggagccaatcaagaattgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttagcttgcaacaattaccct
gaatgcaaaaacaccaaatcgctaaagaacacccctaacgcaaaagaaataatagaaggc
gtgaaatgcccagaatgcgggggggatattgccttaaaaaggagtaagaaaggctcgttt
tatggctgcaacaattaccctaaatgcaattttttatccaaccataagcccatcaacaag
cgttgcgagaaatgccattatttgatgagtgaaagaatctatcgcaaaaaaaaggcgcat
gaatgcattaaatgcaaagagtgcatgtttttagaggaagataatggctaa
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