Helicobacter pylori G27: HPG27_1401
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Entry
HPG27_1401 CDS
T00777
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpg
Helicobacter pylori G27
Pathway
hpg03420
Nucleotide excision repair
hpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPG27_1401 (uvrD)
03430 Mismatch repair
HPG27_1401 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpg03400
]
HPG27_1401 (uvrD)
Enzymes [BR:
hpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPG27_1401 (uvrD)
DNA repair and recombination proteins [BR:
hpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPG27_1401 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HPG27_1401 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
RNase_H_2
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ACI28146
UniProt:
B5Z997
LinkDB
All DBs
Position
complement(1513190..1515238)
Genome browser
AA seq
682 aa
AA seq
DB search
MMDFEKSILDHLNGAQRIAASHVQGPLLILAGAGSGKTKTLTSRLAYLIGVCGVPSENTL
TLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSD
EVKTLCKQLKISNFRANISQIKNGMMDLSVQDSECHKAYELYQNALKKDNLVDFDDLLCL
SLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYG
FRGADISNILNFSKHFKGAKVVKLETNYRSSTEILACANSLISHNQHRHIKTLQSFKGSH
KSVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYR
LIGAVSFYERAEVKDALAFMHLVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDDEDL
NLEEALKLGAFKDKLNPKNEYALNKFIAMIGRLREAFEISVEKFCARFLEETNLLKSYEK
EDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDVHNTENAQKVSCMSVHMSKG
LEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKI
SCSPSVFLEEAKLLQQDNPPKQDHKKDTPIKVGDLIRHKIFGTGRVLGVEKGLSGLCLKI
NCGGNVYDKISEKFVEKVDNGF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttgaaaaaagcattttagaccatttaaacggagcgcaaagaatcgctgca
agccacgttcaagggccattgctcattttagcgggagctgggagcggtaagactaagact
ttaacgagccgtttagcgtatttgattggcgtttgtggcgtgcctagcgagaacacttta
acgctcacttttaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttg
aaaaaccaagcccttatcccccccttgctttgcactttccatcgttttggtttgctgttt
ttaaggcaacacatgaatcttttaaaaagggcgtgcgatttttcggtgctagatagcgat
gaagtgaaaacgctgtgcaaacagctcaaaatttcaaactttagagccaatatttctcaa
atcaaaaacggcatgatggatttaagtgtgcaagatagcgaatgtcataaagcgtatgag
ctttatcaaaacgcgctcaaaaaagacaatttagtggattttgacgatttgctttgttta
agccttaagattttacaagataatgaaaaactcgccaaagagactagcgagcgctaccat
tatattatggtagatgagtatcaagacacgaacgccctgcaattggagtttttaaaaaaa
ttgagtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggt
tttaggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaag
gtggtgaaattagagaccaactaccgctccagcactgaaattttagcgtgcgctaactcc
cttatcagccacaaccaacaccgccatattaaaacgcttcaaagtttcaaaggctcgcat
aaaagcgtggtttgtaaagaatatttgacgcaaaaagaagagagcctggatgtggcttat
caaatcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtatcgc
ttaaacgggcttagccgcagcattgaagagagtttgaacgctttgaatatcccttatagg
ctcattggagcggtgagtttttatgaaagagccgaggttaaagacgctttggcgttcatg
catttagtggcgaaaaaagacgatcgctttttcattaagcgcgttttaaacaagccccca
agaggccttggcaagatcactcaagaatggattttttctcttttagatgatgaagatttg
aatttagaagaggcgttaaaacttggggcgtttaaagacaaattaaaccctaaaaacgaa
tacgctttgaacaaatttatcgctatgatagggcgtttgagggaggcttttgaaatttca
gtagagaagttttgtgctcggtttttagaagaaaccaaccttttaaaaagctatgaaaaa
gaagacaattacgaagaaagagagggctttgttaaagagcttttaagtttagtgaaagag
cattttaaaactaaccccacgcattccctattggattttttgaatgaaagcgtattggat
gtccataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaaggga
ttggagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcataggggg
ttcaatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagg
gctaaagaaggattgcagctctcttatgtcaaagagcgttcgtattttgggaggaaaatt
tcttgctcgccctctgtgtttttagaagaagccaagttgctccaacaagacaacccccct
aaacaggatcataaaaaagacacgcctattaaagtgggggacttgattaggcataagatt
tttggcaccggtagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatc
aattgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataat
gggttttga
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