Helicobacter pylori G27: HPG27_227
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Entry
HPG27_227 CDS
T00777
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpg
Helicobacter pylori G27
Pathway
hpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPG27_227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpg03019
]
HPG27_227
03009 Ribosome biogenesis [BR:
hpg03009
]
HPG27_227
Enzymes [BR:
hpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPG27_227
Messenger RNA biogenesis [BR:
hpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPG27_227
Ribosome biogenesis [BR:
hpg03009
]
Prokaryotic type
rRNA helicases
HPG27_227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
P-loop_SecA
AAA_30
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
ACI26994
UniProt:
B5ZA14
LinkDB
All DBs
Position
250762..252240
Genome browser
AA seq
492 aa
AA seq
DB search
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELLEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTHPHERARSFKKGQHRDRHP
KTNHHSKKPKHR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgatgatgacgcttaccataagccg
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggcttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagatttttaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaaacaatgcgaatttatcaagaaaaacccccaagtg
atgatcgctacaccaggaaggttgttggatcatttaaaaaacgaacgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactacctccctagcgaagcgcagattttgcttttttcagcc
acgatgccagagccgattaaaagactagcggataagattttagaaaaccctattaaaatc
catatcgctccttctaatatcactaacactgacatcacccaacgcttttatgtgatcaat
gagcatgagagggctgaagcgatcatgcgccttttagacacccaagcacccaaaaaaagc
atcgttttcacgcgcactaaaaaagaagccgatgaattgcaccaattccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcgacgcgcttctatc
atggcgtttaaaaaaaatgacgctgatgtgttagtggctacagatgtagcgagccgtggg
ctagatattagcggtgtaagccatgtgtttaattaccacttgcccctaaacaccgagagc
tatatccatcgcattgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccccttagaatacaaagaacttttacgcatgcaaaaagaaattgattcagagatt
gaacttcttgaaatccccaccattaacgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaagggatcatcagcctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccagcaaaattggcttaaaccag
caagaaattgatgcgattcaaaaccctaaagaaaaaacgccaaaaccctctaacaaaaaa
acgcacccgcatgagcgagcgcgttctttcaaaaagggtcagcacagagacagacaccct
aaaacaaaccaccattctaaaaaacccaaacaccgttaa
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