Helicobacter pylori G27: HPG27_396
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Entry
HPG27_396 CDS
T00777
Symbol
fliA
Name
(GenBank) alternative transcription initiation factor, sigma-F
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpg
Helicobacter pylori G27
Pathway
hpg02020
Two-component system
hpg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPG27_396 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPG27_396 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpg03021
]
HPG27_396 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpg02035
]
HPG27_396 (fliA)
Transcription machinery [BR:
hpg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPG27_396 (fliA)
Bacterial motility proteins [BR:
hpg02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPG27_396 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Microp_apicomplexa_17
UPF0122
MarR
MarR_2
KORA
DUF4202
TetR_C_44
HTH_34
HTH_10
DUF7440
YfdX
DUF4404
Motif
Other DBs
NCBI-ProteinID:
ACI27161
UniProt:
B5Z6G2
LinkDB
All DBs
Position
426196..426939
Genome browser
AA seq
247 aa
AA seq
DB search
MPKGIQKTETSEKNIEKVLNAYDKQQHHHQDDLAIQYLPAVRAMAFRLKERLPSSIDFND
LVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRSNRKLIKSIDAE
ITKHLNEHGKEPSDAYLAEALGENIEKIREAKTASDIYALVPIDEQFNAIEQDEITKKIE
AEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRK
SLGVDHG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaggaattcaaaaaactgaaaccagcgaaaaaaatatagaaaaggttttgaac
gcctatgataagcaacaacaccaccatcaagacgatctcgctatccagtatttaccagcc
gtgcgtgctatggcgtttcgtttaaaagagcgtttgcccagctctattgattttaacgat
ctggtttctattggcactgaagaattgattaaattagccaggcgttatgagagcgcgtta
aacgattctttttgggggtatgctaaaactcgtgtcaatggggcgatgctagattatttg
cgctctttagatgtgatttctcgctctaatagaaagctcattaaaagcattgatgctgaa
attaccaaacaccttaatgagcatgggaaagagcctagcgatgcgtatttagcagaagct
ctaggagaaaatattgaaaagattagagaagccaaaacggcttcagatatttatgcgtta
gtgccaatagatgagcaattcaatgcgattgagcaagatgaaatcactaaaaagattgaa
gcagaagagttgttagagcatgtccaaaaagcgttaaatcaaatgagcgaacgagagcaa
atccttatccagctttattactttgaagagttgaatttgagcgagatcaaagagatttta
ggcattactgaatcgcgcatttctcaaatcattaaagaagtgattaaaaaggtgcgtaaa
tccttaggagtggatcatggctga
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integrated database retrieval system
