Helicobacter pylori G27: HPG27_964
Help
Entry
HPG27_964 CDS
T00777
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpg
Helicobacter pylori G27
Brite
KEGG Orthology (KO) [BR:
hpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpg03032
]
HPG27_964
03400 DNA repair and recombination proteins [BR:
hpg03400
]
HPG27_964
Enzymes [BR:
hpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPG27_964
DNA replication proteins [BR:
hpg03032
]
Prokaryotic type
DNA Topoisomerases
HPG27_964
DNA repair and recombination proteins [BR:
hpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPG27_964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
INTS5_N
Motif
Other DBs
NCBI-ProteinID:
ACI27717
UniProt:
B5Z818
LinkDB
All DBs
Position
1051623..1053434
Genome browser
AA seq
603 aa
AA seq
DB search
MSKEFNPIFEIKKSTDKKKDKSTHINYMINQCKDKVVYIATDPDREGYGIGYQFYEKIKN
IAKTIYRTEFHEITKSGVEKGLNNAVLFSQSNLNLYYSWLGRIVSDQFVGFTLTPYLRKN
IKNFEVSAGRVQTPTLSILVELDRKIQAFEQKNIDEKLSYSIEAIIDVLGSQISITLVEE
DKRKVFETKELAQNFLNDLKNNLNPLAFLDAVEQKDKEKAPPKPFTTSNLLKDGVRILEM
GVKQIQECAQKLFESGLITYIRTDSEALSKEYLQEHQAFFENIYPSVYEYREYRAGKNSQ
AEAHEAIRITHPHCYEDLKKVCEKHNITDIDDLKVYTLIFFNTICSQSKNAIYENTTLNF
KVKTHSFKCSFSKLKSKGFKAIKDLEEEKKDEEEIESDLDFSSLQLKTQMPILDFNIKEL
KAKAPSPYTESTFIAMMETYGIGRPSTYTSVFEILKNKNYITLEGKNKKITPTALGKSIV
DFFLNDNQTQWIAISKVDDSFTKKLEEMLDMIIKDGKSAYLDLMQNIQKKLGTEISNLYR
NNSNNNASATKKEMIPPTEKQLNFVETIEKTLQIKASDMTKKDKFACMKFIEEHSKKMPK
KDK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagaatttaatcctatttttgaaatcaaaaaaagcacggataagaaaaaggat
aaatccactcatatcaactatatgataaatcaatgtaaagataaagtggtctatattgct
actgaccctgatagagagggttatggtattggctatcaattttatgaaaaaatcaaaaat
atagctaaaacaatttatcgcacggagtttcatgaaatcacaaaaagcggtgtagaaaaa
ggcttgaacaatgctgtgctattttctcaaagcaatctcaatctctattatagttggcta
ggtaggattgtaagcgatcaatttgtaggctttactttaacgccttatttgcgcaaaaac
attaaaaattttgaagtgagtgctggtagggttcaaactcctactctttccattttagta
gaattagacagaaaaatccaagcctttgaacaaaagaatattgatgagaaattaagctat
agcatagaagctattattgatgtgttaggttctcaaatctctattactttagtagaagag
gataaaaggaaagtgtttgagaccaaagaattagcccaaaactttttaaatgacttaaaa
aacaatcttaaccccttagcttttttagacgcagtagagcaaaaagataaagaaaaagct
ccacccaaacctttcaccacttctaatcttttaaaagatggggttaggattttagaaatg
ggcgttaagcaaatccaagaatgtgcccaaaaactttttgaatctggattgattacttat
attcgcaccgatagtgaagcgttaagtaaagaatacttgcaagagcatcaagcgtttttt
gaaaatatttatcctagcgtgtatgaatacagagaatatagggctggtaaaaattcgcaa
gctgaagcacatgaggctataagaattacacaccctcactgctatgaagatcttaaaaaa
gtgtgcgagaaacacaatattacagatattgatgatttaaaagtctatacgcttatcttt
tttaacaccatttgctctcaaagtaaaaacgctatttatgaaaacacaactttaaatttt
aaagtaaaaacgcacagctttaaatgcagttttagcaaactcaaatctaaaggatttaaa
gcgattaaagatttagaagaggaaaagaaagatgaagaagagattgaaagcgatcttgat
ttttctagcttgcaattaaaaactcaaatgcctattttagattttaatatcaaagaacta
aaagctaaagctcctagtccttatactgaaagcacttttatcgcaatgatggaaacctat
ggcataggaagacctagcacttatacaagtgtatttgagatcttaaaaaacaaaaattac
attacattagagggcaaaaataagaagatcacgcccacagctcttggtaaaagcattgtt
gatttctttttgaatgataaccaaacacaatggattgctatttctaaagtggatgatagt
tttacaaaaaaattagaagaaatgttagatatgattataaaagatggtaaaagtgcttat
cttgatttaatgcaaaatatccaaaagaaattaggcacagaaatttctaacttatataga
aataatagcaataacaacgcttctgctacaaaaaaagaaatgatacctccaactgaaaaa
caacttaattttgtagaaactatagaaaaaactcttcaaataaaagcttctgatatgacg
aaaaaagacaagtttgcgtgcatgaagtttatagaagaacatagtaaaaaaatgcccaaa
aaggataagtga
DBGET
integrated database retrieval system
